Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_4016 |
Symbol | |
ID | 5193539 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 4526256 |
End bp | 4530281 |
Gene Length | 4026 bp |
Protein Length | 1341 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640588489 |
Product | molybdopterin oxidoreductase |
Protein accession | YP_001269324 |
Protein GI | 148549222 |
COG category | [P] Inorganic ion transport and metabolism [R] General function prediction only |
COG ID | [COG0369] Sulfite reductase, alpha subunit (flavoprotein) [COG3383] Uncharacterized anaerobic dehydrogenase |
TIGRFAM ID | [TIGR01931] sulfite reductase [NADPH] flavoprotein, alpha-component |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.115945 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCAACA GCGAAGTACG CAGCGTCTGC CCCTACTGCG GCGTGGGCTG CGGCATCGTC ATGAGCGTTG CCGATGGCAA GGTCGGCAAG ATCAGCGGCG ACAAGCTGCA CCCGAGCAAC TTTGGCCGCC TATGCACCAA AGGCCTCACC GCACACCTGC CACTGAGTGC CAGCGGGCGC ATGGCCGACG CCTATGTGCG CCAGCAACGC AGCCAGCCGC CAGTGCGCAC CAGCATGGAC CAGGCCATCG CTGCCACCGC CGAGCGTCTG CGCAGCATCA TCGACCAGCA CGGCCCGGAT GCCGTGGCGC TCTACGTGTC CGGGCAAATG TCGCTGGAGG CCCAGTACCT GGCCAACAAG TTGGCCAAGG GCTTTATCCG TACGCGCCAC ATCGAGTCCA ACTCGCGCCT GTGCATGGCC AGCGCCAGCA GTGGCTACAA GCTGTCGCTT GGCGCCGATG GCCCACCTGG CAGTTACCAG GACTTCGAGC ACGCCGACGT ATTTTTGGTG ATCGGCGCCA ACATGGCCGA CTGCCACCCG ATCCTGTTCC TGCGCCTGCT TGATCGGGTC AAGGCCGGTG CGAAGCTGAT CGTCGTCGAC CCACGTCGCA GCGCCACCGC CGACAAGGCC GACCTGTTTC TGCAGGTGCG CCCCGGCAGC GACATGGCCT TGCTCAACGG CCTTTTGCAC CTGCTGCATC GCAATGGCCG CACCCACCCC GACTTCATCG CCCGCCACAC CGAAGGCTGG GACGAACTGC CGGCCTTCCT CGACGACTAC CCCCCCGAGC GCGTCGCCGC CATCACCGGG CTGGCCGAGG CCGATATCAT CAAGGCCGCC GAATGGATCG GCAGCGCCAA CAACTGGATG AGCTGCTGGA CCATGGGCTT GAACCAGAGC ATTCACGGTA CCTGGCACAG CAACGCCATC TGTAACCTGC ATTTGGCCAC GGGTGCCATC TGCCGCCCCG GTAGCGGCCC GTTCTCGCTG ACCGGCCAGC CCAATGCCAT GGGCGGCCGC GACATGGGCT ACATGGGCCC CGGCTTGCCA GGCCAGCGCT CAGCGTTGGC GGACGACGAC CGCGCGTTCG TCGAGCGACA GTGGCAACTG CCACCCGGCA GCCTGCGCAG CGAGGGTGGC GAGGGTACGG TGGCGCTGTT CGGGCAGATG AAAACCGGTG AAGTGAAAGC CTGCTGGGTC ATCTGCAGCA ACCCGGTAGC CAGTGTCGCC AACCGCCAGC AAGTGATCGA CGGCCTGCGC AAGGCCGAAC TGGTCATTAC CCAGGACGCC TTCCTCGACA CCGAAACCAA CCGCTACGCC GACATCCTCC TGCCGGCCGC GCTGTGGGCC GAAGGTGAGG GTGTGATGAT CAACAGCGAG CGCAACCTGA CCCTGATGCC ACGCGCTGTC GAGCCCCCCG GGCAAAGCTT GCCGGACTGG CAGATCATTG CCCGCGTGGC GTGTGCCATG GGCTATGCCG ACGCCTTCGA CTACCCCAAT GCCGAAGCGG TGTATGAGGA AATACGCCGC TTCCACAACC CTGTTACCGG TTATGACCTG CGCGGTATCG GCTATGCCGA ATTGCGGACA CAGCCGCGCC AGTGGCCTTG TGCACCGGGC AGCGAGCAGC ATCGTAGCCC GCTGCGCTAC CTCAACGACG GCAGCAGCCA GGCGCTCCTG CTCGATGCCC GGGGTAGGCG GCCGGCACTG GCCTTTCCCA CCGCCAGCGG CAAGGCGCGC TTCTTTGCGC GGCCCTGGTT GCCGGCAGCG GAAGTGCCGG ACGATGACTA CCCCATGGTG CTTAACACTG GCCGTGTGCA GCACCAATGG CACACGTTGA CCAAGACCGG CAAGGTGCCG GCACTGAACA AGCTGGAGCC CGGCCCCTAC CTTGAGATTC ACCCCGAGGA TGCCGCCCGG CTGGGTGTCG CTGAAAAGGA CCAGGTGGCC GTTCGCTCAC GCCGGGGGCA CGCCGTGTTG CCGGCGCGCA TCAGTGACCG GGTCATGCCG GGCAACTGCT TTGCGCCGTT TCACTGGAAT GACCTGATCG GCGAGCAATT GGCGATCAAT GCCGCGACCT GCGATGCGGT CGACCCGCTG TCGCTGCAGC CTGCCTTCAA ACACTGCGCC ATAGCCCTGG AGCGGGTCGC AGGCGAGCGC ATCGACGCCC TTGATCTGAA CACTGCCACT GTAGAGCCTG TCCGCATGCC GACCGCCACC CTGTCCCGTC TGCTTGGCCT GCACACCCTG CCGGTTCCGG TGCTGGCCGA AGAAGAGCGT CATTACCTGC AAGGTTTCCT GCTGGGCCTG GACCAGGCCC GCGCCGAGGG CGTACCCCGC CTGCCGCCCA GTGCGCCGCT GGCTGCCAGC CGTCGTTTGT TTGTCGACGG TTTGCTGGCC GGGCTGTTCG CCCAGCCTGC AACTGCGCCC ATCGCGGCAC AGGCCGCGCC ATGGCATCAG GTGCTGTGGG CCTCGCAGAC CGGCAATGGT GAGCAACTGG CCGAACGCTG TGCCGCGCGC CTGCGCGATG CTGGTCTGAA CGTGCAACTC AGCTGCCTGG AGGCGGTCAG CCCAAGCCAG CTGCAGGGTG TTGCCAGTGT GGTGTTGATC GCCAGCACCT TTGGCGATGG CGACGCGCCC GACAGCGGCG CGGCATTCTG GCAGGCCTTG CAGGGCGAGG AGGGCGCCCA CTGCGCCGGG CTGCCCTATG CCGTACTGGC CTTGGGCGAC TCCAGTTACG ACCAGTTCTG CGGTTTTGGC CGCAAGCTCG ACCAGCGCCT GGCCGAGCTG GGAGGGCAGC GCCTGCTGCA ACGGGTGGAC TGCGAGCCAG ACTTCGACGA AGCCTTTGCC AGTTGGCTCG AAGCGTTATT ACCTGCACTG GGCACTGCCG CGGCGCCACC TCCGGCGAGT GAAGCTGCAC CCGTATCGGC CTTCAGCAAG CAGCAACCCT GGATGGCCAC CGTGCTGGAA AACCGCCTGC TCAATGGCCC CGGCGCCAGC AAGGAAACCC GCCAGCTGGT CTTCGACCTG GGCGGCAGCG GCTTCAGTTA TGCTGCCGGC GATGCCTTGG GCGTATGGCC GCGCAACTGC CCGGCCCTGG TAGAAGAGCT GCTGACACTG ATGCAGCTCG ATGGCCAGGC GATGGTCGAG CTTAAAGGTC ATTGCGCCAT GCCATTGGCC GAAGCCCTGC AAGCACATCT GGAAATTGCC AAGGTCACTG CACAACAACT GCAGGCATTT GCCAGCAATG CGCCTGACCT GCAGCGGTTG CTGCAGCCTG AATGCAAGGC CGAGCTGCAA GATTGGCTGT GGGGCCGGCA GCTGGTCGAT GTGCTGCGCG CTTTCCCCCA GCAGTTGCCG CTGGCCAGCT GGCTGGAACT GCTCAAGCCA TTGCAGCCGC GGCTCTATTC GATCAGTTCC AGCCCGCTGG CGCACCCAGG CCAGGTGCAT CTGACGGTAT CGACGGTGCG TTATGGCGAA CGTAAAGGCG TGTGCTCAAG CTTCCTTGCC GACCGTGCGC AGGTGCAGAA AGTGGCGATC TTCCCGCAGG TGTCGAAGCA CTTCCGCTTG CCCGAGGACG ACAGCGTGCC GGTGATCATG GTGGGCCCTG GTACTGGCAT TGCACCGTTC CGTGCGTTCC TCGAGGAGCG AGAGGCACGG GGGGCAAAAG GTGACAACTG GCTGTTCTTC GGTGAGCAGT ACGCAGCGAC CGATTTCTAT TACCAGGAGC AGTTGCAGGC CTGGGAGGCG GCGGGGCACC TGCGGCTGAA CACGGCGTTC TCGCGGGACC AGGTCGAGAA GATCTATGTG CAGCAGCGCA TGCTTGAGCA GGGTGCGCTG TTGTGGCAGT GGCTGGAGGC GGGGGCGTAT TTCTATGTGT GTGGCGATGC GCAGCGTATG GCCAGGGATG TGGATGCGGC GTTGCGGGTA ATCGTCGCCG AGCATGGCCG GATGGATGCG GCGGCGGCGG CGGCTTATGT CGAAGGCTTG AGCAAGGCCA GGCGTTATCG GCGCGATGTG TACTGA
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Protein sequence | MANSEVRSVC PYCGVGCGIV MSVADGKVGK ISGDKLHPSN FGRLCTKGLT AHLPLSASGR MADAYVRQQR SQPPVRTSMD QAIAATAERL RSIIDQHGPD AVALYVSGQM SLEAQYLANK LAKGFIRTRH IESNSRLCMA SASSGYKLSL GADGPPGSYQ DFEHADVFLV IGANMADCHP ILFLRLLDRV KAGAKLIVVD PRRSATADKA DLFLQVRPGS DMALLNGLLH LLHRNGRTHP DFIARHTEGW DELPAFLDDY PPERVAAITG LAEADIIKAA EWIGSANNWM SCWTMGLNQS IHGTWHSNAI CNLHLATGAI CRPGSGPFSL TGQPNAMGGR DMGYMGPGLP GQRSALADDD RAFVERQWQL PPGSLRSEGG EGTVALFGQM KTGEVKACWV ICSNPVASVA NRQQVIDGLR KAELVITQDA FLDTETNRYA DILLPAALWA EGEGVMINSE RNLTLMPRAV EPPGQSLPDW QIIARVACAM GYADAFDYPN AEAVYEEIRR FHNPVTGYDL RGIGYAELRT QPRQWPCAPG SEQHRSPLRY LNDGSSQALL LDARGRRPAL AFPTASGKAR FFARPWLPAA EVPDDDYPMV LNTGRVQHQW HTLTKTGKVP ALNKLEPGPY LEIHPEDAAR LGVAEKDQVA VRSRRGHAVL PARISDRVMP GNCFAPFHWN DLIGEQLAIN AATCDAVDPL SLQPAFKHCA IALERVAGER IDALDLNTAT VEPVRMPTAT LSRLLGLHTL PVPVLAEEER HYLQGFLLGL DQARAEGVPR LPPSAPLAAS RRLFVDGLLA GLFAQPATAP IAAQAAPWHQ VLWASQTGNG EQLAERCAAR LRDAGLNVQL SCLEAVSPSQ LQGVASVVLI ASTFGDGDAP DSGAAFWQAL QGEEGAHCAG LPYAVLALGD SSYDQFCGFG RKLDQRLAEL GGQRLLQRVD CEPDFDEAFA SWLEALLPAL GTAAAPPPAS EAAPVSAFSK QQPWMATVLE NRLLNGPGAS KETRQLVFDL GGSGFSYAAG DALGVWPRNC PALVEELLTL MQLDGQAMVE LKGHCAMPLA EALQAHLEIA KVTAQQLQAF ASNAPDLQRL LQPECKAELQ DWLWGRQLVD VLRAFPQQLP LASWLELLKP LQPRLYSISS SPLAHPGQVH LTVSTVRYGE RKGVCSSFLA DRAQVQKVAI FPQVSKHFRL PEDDSVPVIM VGPGTGIAPF RAFLEEREAR GAKGDNWLFF GEQYAATDFY YQEQLQAWEA AGHLRLNTAF SRDQVEKIYV QQRMLEQGAL LWQWLEAGAY FYVCGDAQRM ARDVDAALRV IVAEHGRMDA AAAAAYVEGL SKARRYRRDV Y
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