| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_4014 |
|---|
| Symbol | |
|---|
| ID | 5192539 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida F1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009512 |
|---|
| Strand | - |
|---|
| Start bp | 4523062 |
|---|
| End bp | 4523424 |
|---|
| Gene Length | 363 bp |
|---|
| Protein Length | 120 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640588487 |
|---|
| Product | nitrite reductase (NAD(P)H), small subunit |
|---|
| Protein accession | YP_001269322 |
|---|
| Protein GI | 148549220 |
|---|
| COG category | [P] Inorganic ion transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG2146] Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases |
|---|
| TIGRFAM ID | [TIGR02378] nitrite reductase [NAD(P)H], small subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 41 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACCTGG CTAATGTTGC TGTGAACACG CAAGAAAACT GGCAGCCGGT GTGCCAGGCA
CAAGACCTGG TGGCCGACTC CGGCGTCGTG GTTTGGTTCG ATGGGGCCCA GGTGGCGTTG
TTCTACCTGC CGGGGCAGTC CCAGCCGCTG TATGCAGTGG ACAATCGCGA CCCACGCTCC
GGCGCCAACA TCATCGGCCG CGGGCTGGTG GGCAGTGTGC AAGGTGAGCT GGTGGTGGCA
GCGCCGCTCT ACAAGCAGCA CTTCAGCCTG CTGAGTGGGG AGTGCCTGGA GGATGCCGGG
CAGAGGTTGC GGGTGTGGCC GGTGCGGTTG AAGGGGGAGG CGGTGGAGCT GGCGGTGGCC
TGA
|
|---|
| Protein sequence | MNLANVAVNT QENWQPVCQA QDLVADSGVV VWFDGAQVAL FYLPGQSQPL YAVDNRDPRS
GANIIGRGLV GSVQGELVVA APLYKQHFSL LSGECLEDAG QRLRVWPVRL KGEAVELAVA
|
|---|
| |