| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_4013 |
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| Symbol | |
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| ID | 5192538 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 4521984 |
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| End bp | 4522934 |
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| Gene Length | 951 bp |
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| Protein Length | 316 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640588486 |
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| Product | D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding |
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| Protein accession | YP_001269321 |
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| Protein GI | 148549219 |
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| COG category | [C] Energy production and conversion
[H] Coenzyme transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1052] Lactate dehydrogenase and related dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.649102 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACCAG AAGTCCTGCA ACTGAGCCCT ATCCTGATCC CGCAGATCCG TGAGCGCCTG
GAACAGCTGT TCACCGTACA CCGTTACTAC GAACAGGCCG ACAAGGATGC CTACGTCAGC
CAGTATGCAA GCAACATTCG GGGCGTGATT ACCGGCGGCC ACACCGGCAT CAGCCAGGCG
CTGATGGCGC GCCTGCCCAA CCTCGAAGTG ATCGCCGTCA ATGGCGTCGG CACCGACGCG
GTAGACTTGG CCTATGCCCG CGATCGCGGC ATCCAGGTGA CGGCGACCCT CGGTGCGCTC
ACCGAGGACG TCGCCGATCT TGCCATCGGC CTGCTGATCG GCTTGTGCCG GGGTATCTGC
ACCGGTGACC GCTTCGTTCG CGCCGGCCGT TGGGCCACCA GCACCACGCC GCTGGCACCG
CTGCCACTGG CCCGGCAGGT GTCGGGCATG CGCGTGGGCA TCGTCGGCAT GGGCCGGGTC
GGGCGGGCGG TAGCACAGCG GGCGACAGCC TTCGGTTGCC CGATCCGCTA CACCGATCTA
CAGGCGCTGG ATGTGCCCTA CGGGTTCGAG GCAGATCTGC TGCAGTTGGC CAAGGACAGC
GATGCGCTGA TCCTCGCGGC GGCGGCTGAC AAGGGCGAGG CGCTGATCAA TCGCGACGTG
CTGCGGGCGT TGGGCGCCGA GGGGTATCTG ATCAATATCG CACGCGGCAA GCTGGTGGAT
GAACCCGCGT TGGTCGCGGC GTTGCAGGCC GGCGAGATCG CTGGCGCGGC GCTGGATGTG
TTTGCCGATG AACCGCGAGC GCCCGAGGCG TTGTTCGAGC GCGAAGATGT AGTCCTGCAA
CCGCATCGCG CCAGTGCCAC GGTACAGACA CGCACGCGCA TGGGCGAGAT GGTGGTGGCC
AGCCTGGTGG ATGTATTTGC CGGACGCAAA CCGCAGGGGT TGGTTATCTA G
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| Protein sequence | MKPEVLQLSP ILIPQIRERL EQLFTVHRYY EQADKDAYVS QYASNIRGVI TGGHTGISQA
LMARLPNLEV IAVNGVGTDA VDLAYARDRG IQVTATLGAL TEDVADLAIG LLIGLCRGIC
TGDRFVRAGR WATSTTPLAP LPLARQVSGM RVGIVGMGRV GRAVAQRATA FGCPIRYTDL
QALDVPYGFE ADLLQLAKDS DALILAAAAD KGEALINRDV LRALGAEGYL INIARGKLVD
EPALVAALQA GEIAGAALDV FADEPRAPEA LFEREDVVLQ PHRASATVQT RTRMGEMVVA
SLVDVFAGRK PQGLVI
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