| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_4012 |
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| Symbol | |
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| ID | 5195285 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 4521201 |
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| End bp | 4521959 |
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| Gene Length | 759 bp |
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| Protein Length | 252 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640588485 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001269320 |
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| Protein GI | 148549218 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4221] Short-chain alcohol dehydrogenase of unknown specificity |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.448835 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCAGA ACAAGAAAAT CGCCCTGGTC ACCGGTGCCG GTAGCGGCAT CGGCCGCGCC
GTCGCCCTCG CCCTGCTGGA GGATGGCTTC AGCCTGGTGC TCGCCGGGCG CCGCGCCGAA
CCCCTGCAAG CCGTGGTTGC ACAGGCGCTG GCAGCAGGCG GTGAGGCACT GGCCGTGCCC
ACCGATGTAC GCGACGAGCA AAGCGTCGCG CAGCTGTTCG CCACCATCGA AGAAGTGCAC
GGCCGGCTCG ATGTGATCTT CAACAATGCC GGCATCAACG CGCCCGCCGT GCCGGTGGAC
GAGCTGCCGT TGGAGAACTG GCGCAACGTC ATGGCCACCA ACGTCGATGG TGTGTTCCTG
TGCGCCCGCG CCGCCTTCGG CCTGATGCGC CGCCAGCAGC CGCAAGGCGG GCGAATCATC
AATAACGGCT CGATCTCGGC GCACACCCCA CGCCCGTTCA CCGCACCTTA CACCGCCAGC
AAGCATGCGG TGCTGGGCCT GACCAAGGCG CTGGCGCTGG ATGGTCGGCC TTACCACATC
GTGTGCAGCC AGTTGGACAT CGGCAACGCC CTGACCGAGT TGTCCGAGCG CATGACCCGT
GGGGTGCGCC AGGCCAATGG CGAGATCGCC GCCGAACCGA TGCTCGACGT GCGCCATGTG
GCCGATGCGG TGCGCTACAT CGCAGCGCTG CCGCTCGACG CCAACGTACT GAACATGACC
GTGATGGCCA GCAACATGCC GTTCGTTGGC CGTGGCTGA
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| Protein sequence | MTQNKKIALV TGAGSGIGRA VALALLEDGF SLVLAGRRAE PLQAVVAQAL AAGGEALAVP
TDVRDEQSVA QLFATIEEVH GRLDVIFNNA GINAPAVPVD ELPLENWRNV MATNVDGVFL
CARAAFGLMR RQQPQGGRII NNGSISAHTP RPFTAPYTAS KHAVLGLTKA LALDGRPYHI
VCSQLDIGNA LTELSERMTR GVRQANGEIA AEPMLDVRHV ADAVRYIAAL PLDANVLNMT
VMASNMPFVG RG
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