| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_4009 |
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| Symbol | |
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| ID | 5190713 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 4517686 |
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| End bp | 4518615 |
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| Gene Length | 930 bp |
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| Protein Length | 309 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640588482 |
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| Product | helix-turn-helix domain-containing protein |
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| Protein accession | YP_001269317 |
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| Protein GI | 148549215 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.125602 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.35131 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCCCCA AGCGCGAGGT TCCGACCTAT GTCATGCAGC AGCGCAGCGA GCTGATGGAT
TTCTACATCC GCGACCAGCG CGGGCGTCCC GCCGAGACCG CGCCGCATCG TCATGAGTAC
TTCCAGATCC AGGTCAATCT CGGCGGCGAC ACGGTGCAAC ACATCGGCAG CGTGCAACGC
CCATTCAGAC GCAACACCCT GGCCTTCATC CTGCCTCACC GGGTGCATGT GATCCCGCAT
CCGGAGGACA GCGACTTCGT GGTGATCAAT TTCTCCCAGA CGTTCCTGCT GCCGCACCTG
GCCTGCGACC CGATGGACCT GGAGGAAGTG TCGATCCTGC AGGCGCCGGA GCTGTCGCCG
TTCCGCTTTC AGGAGCATCT CGACTTCTAC CTGAGTGAGC CGGACTTTGC CGAGGTACGG
CAAACCCTCG AGCGCATGCG TGCGCTGGAT GCCAACCGCC GTTTCGGCAC CCGCGAAATC
CTCAAAGGCC TGTTGCTGCA GCTGATCGGC CAGGTCTGTG GCCTGTATGC CGAGCCGCTG
CGCGAACTGG CCGACAGCAA CGCTGCCCAG CTCAGCCGCC GTGCTGCGCT GGGCCGCATG
AGCGACTACC TGCGCCGGCA TATCGACGAC CCCGACCTGA ACCTGCAGAA AGTCGCTGCC
GCCACCTACC TGTCGCCGAC CTACCTGACC CACTGGCTGC GCAAGGAAAT CGGCAAGACC
TTCAGCGAGC TGGTGCTGGA GCGGCGCATG CACGCCGCAC GCAACTACCT GCTCAACGGC
AGCCGCCCAG TGGGCGAGGT GGCGCGGCTT TGTGGCTTTG CGGACGAAGC CTACTTCTCT
CGACGTTTCC GCCAGATCCA CGGCCTGCCA CCTGGCCAGT TCCGACGCCA GCAACGCGAC
CCGGATACGC CGCAGGCGGC AATGCTTTAA
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| Protein sequence | MPPKREVPTY VMQQRSELMD FYIRDQRGRP AETAPHRHEY FQIQVNLGGD TVQHIGSVQR
PFRRNTLAFI LPHRVHVIPH PEDSDFVVIN FSQTFLLPHL ACDPMDLEEV SILQAPELSP
FRFQEHLDFY LSEPDFAEVR QTLERMRALD ANRRFGTREI LKGLLLQLIG QVCGLYAEPL
RELADSNAAQ LSRRAALGRM SDYLRRHIDD PDLNLQKVAA ATYLSPTYLT HWLRKEIGKT
FSELVLERRM HAARNYLLNG SRPVGEVARL CGFADEAYFS RRFRQIHGLP PGQFRRQQRD
PDTPQAAML
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