Gene Pput_4004 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_4004 
Symbol 
ID5190467 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp4512900 
End bp4513337 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content67% 
IMG OID640588477 
Producthypothetical protein 
Protein accessionYP_001269312 
Protein GI148549210 
COG category[S] Function unknown 
COG ID[COG3339] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000126182 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.882124 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCAC CCTGGAATTT TGCCCGTTTC CTGCCGTTGG CCGAGCGCCT GCTCAGCCGC 
GGTCGTTTGC CGGCCCTGCT GTTCGCGGTG GCGCGCAAAG GCCCGCGCCT CGGCCAACTG
CGTGAAGACG TGAAGCTGCT GCAGTCGCTG TGCCTGGCCT GGTGGAGGGG GGAGTACCGC
GCCATCAGCC CCAAGGCACT GGTCACTGTC GTGGCAGGCC TGCTGTATTT CGTCAGCCCC
ATCGATGCCA TCCCTGACTG GTTGCTGGGG GTGGGTTTCC TCGATGACAT CGCGGTGCTG
GGCTGGGTGT TGAAAACCGT GGCCGACGAG TTGGCGCGCT TCAAGGCCTG GCGCGATAGC
CAGGCACCCG AGCGGCTGCG CGTGGTCGAG CGCCTGCCGG CTACCCCGGA AGCGCTGCGG
CTGGAGCGCA ACAAGTAA
 
Protein sequence
MSAPWNFARF LPLAERLLSR GRLPALLFAV ARKGPRLGQL REDVKLLQSL CLAWWRGEYR 
AISPKALVTV VAGLLYFVSP IDAIPDWLLG VGFLDDIAVL GWVLKTVADE LARFKAWRDS
QAPERLRVVE RLPATPEALR LERNK