Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_4004 |
Symbol | |
ID | 5190467 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 4512900 |
End bp | 4513337 |
Gene Length | 438 bp |
Protein Length | 145 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640588477 |
Product | hypothetical protein |
Protein accession | YP_001269312 |
Protein GI | 148549210 |
COG category | [S] Function unknown |
COG ID | [COG3339] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0000000126182 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.882124 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGCAC CCTGGAATTT TGCCCGTTTC CTGCCGTTGG CCGAGCGCCT GCTCAGCCGC GGTCGTTTGC CGGCCCTGCT GTTCGCGGTG GCGCGCAAAG GCCCGCGCCT CGGCCAACTG CGTGAAGACG TGAAGCTGCT GCAGTCGCTG TGCCTGGCCT GGTGGAGGGG GGAGTACCGC GCCATCAGCC CCAAGGCACT GGTCACTGTC GTGGCAGGCC TGCTGTATTT CGTCAGCCCC ATCGATGCCA TCCCTGACTG GTTGCTGGGG GTGGGTTTCC TCGATGACAT CGCGGTGCTG GGCTGGGTGT TGAAAACCGT GGCCGACGAG TTGGCGCGCT TCAAGGCCTG GCGCGATAGC CAGGCACCCG AGCGGCTGCG CGTGGTCGAG CGCCTGCCGG CTACCCCGGA AGCGCTGCGG CTGGAGCGCA ACAAGTAA
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Protein sequence | MSAPWNFARF LPLAERLLSR GRLPALLFAV ARKGPRLGQL REDVKLLQSL CLAWWRGEYR AISPKALVTV VAGLLYFVSP IDAIPDWLLG VGFLDDIAVL GWVLKTVADE LARFKAWRDS QAPERLRVVE RLPATPEALR LERNK
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