| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_3997 |
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| Symbol | |
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| ID | 5193116 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 4505743 |
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| End bp | 4506732 |
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| Gene Length | 990 bp |
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| Protein Length | 329 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640588470 |
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| Product | ABC transporter related |
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| Protein accession | YP_001269305 |
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| Protein GI | 148549203 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0225535 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.167206 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCTTCG TCAGCGTACA GAAACTGCAG AAAAGCTACG CCGGCAGCCC GGTGTTCGAG
CGCATCGACT GCCACATCGA ACGCGGCGAA TTCGTCACCC TGCTCGGCCC GTCCGGCTGC
GGCAAGTCCA CCCTGCTGCG CTGCATTGCC GGTCTGACCT CGGTGGACAG CGGGCAGATA
CTGCTCGACG GCCACGACAT CGTGCCGCTA AGCCCGCAAA AGCGTGGCAT CGGCATGGTG
TTCCAGAGCT ACGCGCTGTT CCCTAACATG ACCGTGGAGC AGAATGTCGC CTTCGGCCTG
CGCATGCAGA AGGTCAAGGC CGATGAAAGC CAGCTGCGGG TACGCGAGGT GCTGGAGCTG
GTGGAGCTGG GCAAGTTCGC CGGGCGCTAC CCGCACCAGC TTTCCGGTGG CCAGTGCCAG
CGCGTGGCCC TGGCACGCTC ACTGGTCACC CGCCCGCGCC TGCTGCTGCT CGACGAACCG
TTGTCGGCGC TGGATGCGCG TATCCGCAAG CACCTGCGCG AGCAGATTCG CGCCATCCAG
CGCGAACTGG GGCTGACCAC CATATTCGTC ACTCACGATC AGGAGGAAGC GCTGACCATG
TCCGACCGCA TCTTCCTGAT GAACCAGGGG CGCATCGTCC AGAGCGGCGA TGCCGAAACC
CTCTACACCG CCCCCGTGGA CCTGTTTGCC GCCGGCTTCA TCGGCAACTA CAACCTGCTC
GACGCCGACA GCGCCAGCCG CCTGCTGCAG CGCCCGGTGG CCAGCCGCCT GGCGATCCGC
CCAGAGTCGA TCACCCTAGG CGTGCACGGC GAGCTGGACG CCGAGGTGCG CAGCCACAGC
CTGCTGGGCA ACGTGATCCG CTACCGGGTG CGGGTGCGCG ACGTGGAGCT GGTGGTCGAT
GTGCTCAACC GCTCGCCGGC CGACTTGCAT GCGGACGGAA AACGGGTAAG CGTGTCGATC
GACCCCACTG CGCTGCGGGA AGTGGCTTAA
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| Protein sequence | MSFVSVQKLQ KSYAGSPVFE RIDCHIERGE FVTLLGPSGC GKSTLLRCIA GLTSVDSGQI
LLDGHDIVPL SPQKRGIGMV FQSYALFPNM TVEQNVAFGL RMQKVKADES QLRVREVLEL
VELGKFAGRY PHQLSGGQCQ RVALARSLVT RPRLLLLDEP LSALDARIRK HLREQIRAIQ
RELGLTTIFV THDQEEALTM SDRIFLMNQG RIVQSGDAET LYTAPVDLFA AGFIGNYNLL
DADSASRLLQ RPVASRLAIR PESITLGVHG ELDAEVRSHS LLGNVIRYRV RVRDVELVVD
VLNRSPADLH ADGKRVSVSI DPTALREVA
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