| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_3995 |
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| Symbol | |
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| ID | 5192613 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 4504130 |
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| End bp | 4504957 |
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| Gene Length | 828 bp |
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| Protein Length | 275 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640588468 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001269303 |
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| Protein GI | 148549201 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4132] ABC-type uncharacterized transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.301852 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.487139 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTGGCC GCTACCTGGC CCTGCTCTGC CTGCTGCCGT TCGCCGTGTT CTTCGTCATT
TTCCAGGTCG CCCCGCTGGC CTGGGTGGCG ATCAACAGCC TGCAATCGGA GGCCGGCTGG
GGCATCGACA ACTTCAGCAA GGTGTTCGCC TCCAAGTTCT ACCTGCAGGC GTTGCAACGC
AGCCTTGAAA TCAGCTTCTG GTCGAGCGTG TTCGGCATCG TCATCGCTAC CCTCGGCGCC
TACTCGCTGC GCCAGGTGGA CTCGAAGCTG CGCGATTTCG TCAGCGCCTT CGCCAACATG
ACCAGCAACT TTGCCGGCGT ACCGCTGGCC TTTGCCTTCA TCATCCTGCT TGGCTTCAAC
GGCGCGCTGA CGCTGCTGCT GAAGCAGGTC GGCCTGCTGG AAGACTTCAG TATCTATTCC
AAAAGCGGCT TGATCCTGGT GTACACCTAC TTCCAGATCC CGCTGGGCGT ATTGCTGCTG
TACCCCGCCT TCGACGCCCT GCGCGAAGAC TGGCGCGAGT CAGCCGCGCT GCTGGGCGCC
AACCACTGGC AGTACTGGCG ACACATCGGC CTGCCGGTGC TGGCCCCGGC ACTGCTGGGC
ACCTTCGTCA TCCTGCTGGC CAACGCCCTC GGCGCCTACG CCACCGTGTA CGCACTGACC
ACCGGCAACT TCAACGTACT GCCGATCCGC ATCGCCGGCC TGGTGGCGGG CGACATCAGC
CTCGATCCGA ACCTGGCCAG CGCCCTGGCG ATGGTGCTGG TGGGGCTGAT GACGCTGGTC
ACGGTGGTGC ATCAATGGCT GCTGAAAAGG AGCTACCATG CGCGCTGA
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| Protein sequence | MRGRYLALLC LLPFAVFFVI FQVAPLAWVA INSLQSEAGW GIDNFSKVFA SKFYLQALQR
SLEISFWSSV FGIVIATLGA YSLRQVDSKL RDFVSAFANM TSNFAGVPLA FAFIILLGFN
GALTLLLKQV GLLEDFSIYS KSGLILVYTY FQIPLGVLLL YPAFDALRED WRESAALLGA
NHWQYWRHIG LPVLAPALLG TFVILLANAL GAYATVYALT TGNFNVLPIR IAGLVAGDIS
LDPNLASALA MVLVGLMTLV TVVHQWLLKR SYHAR
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