| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_3994 |
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| Symbol | |
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| ID | 5195279 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 4503300 |
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| End bp | 4504121 |
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| Gene Length | 822 bp |
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| Protein Length | 273 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640588467 |
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| Product | type I phosphodiesterase/nucleotide pyrophosphatase |
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| Protein accession | YP_001269302 |
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| Protein GI | 148549200 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1524] Uncharacterized proteins of the AP superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.236352 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.332421 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGGAG AAAACATGCA ACACAACGTC ATCCTGGTCC TGCTTGACGG CCTCAACTAC
CAGGTCGCCC ACCATGCGAT GGGCCACCTG CACGCCTACG TCGAAGCAGA TCGCGCCGCG
CTGTACCGCG TGGAATGCGA GCTGCCCTCG CTGTCGCGGC CGCTGTACGA ATGCATCCTC
ACCGGCGTGC CACCGATCGA CAGCGGCATC GTGCACAACA ACATCAACCG CTTGTCCAAC
CAACGCAGCG TGTTTCACTA CGCCCGCGAG GCCAACCTGG GCACCGCAGC GGCGGCTTAT
CACTGGATGA GCGAGCTGTA CAACCGCTCG CCCTTCGACC CGCAGCGTGA CCGCCACACC
CACGCGCCGA AGCTGCCGAT CCAGCACGGG CTGTTCTACT GGGACGACCG CTACCCCGAT
TCGCACCTTC TGGCCGATGG CGAGTACCTG CGCCGCCGTC ACGCCCCCAA CTTCCTGCTG
GTGCACCCGA TGAGCGTTGA CGACGTGGGT CACCGCCACG GCCTGGACAG CAGCCAGTAT
CGCAACGCTG CGCGCAGCGT TGACATTCTG CTGGCCGACT ACCTGCCTGG CTGGCTCGAA
GAGGGCTATC AGGTATTGGT CACCGCCGAC CACGGCATGA ACAACGACCG CTCGCACAAC
GGCCTGCTGG CTGAAGAACG TGAAGTGCCG CTGTTCGTCT TCGGCGACGC CTTCAGCCTG
GACCCGGCCG CCAAGCCGCT GCAAACCGAA CTGTGCGGCA CCATCTGCGA GCTGCTGGGC
GCCGCGCACG ACAAGACGGT TTGCCGGGAG TTGCTGAAGT GA
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| Protein sequence | MTGENMQHNV ILVLLDGLNY QVAHHAMGHL HAYVEADRAA LYRVECELPS LSRPLYECIL
TGVPPIDSGI VHNNINRLSN QRSVFHYARE ANLGTAAAAY HWMSELYNRS PFDPQRDRHT
HAPKLPIQHG LFYWDDRYPD SHLLADGEYL RRRHAPNFLL VHPMSVDDVG HRHGLDSSQY
RNAARSVDIL LADYLPGWLE EGYQVLVTAD HGMNNDRSHN GLLAEEREVP LFVFGDAFSL
DPAAKPLQTE LCGTICELLG AAHDKTVCRE LLK
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