Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_3993 |
Symbol | |
ID | 5195278 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | + |
Start bp | 4502121 |
End bp | 4503185 |
Gene Length | 1065 bp |
Protein Length | 354 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640588466 |
Product | ABC-type Fe3+ transport system periplasmic component-like protein |
Protein accession | YP_001269301 |
Protein GI | 148549199 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1840] ABC-type Fe3+ transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.249752 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.268451 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAAGT TCTTCATGGC GTCACTGCTT GGTTCGGCCA TCGCGTTGTG CACCACGGCC ATGGCCGCCG GCACTGACCT CAAGGCCCTG GAAGACGCCG CCCGCAAGGA AGGCACTGTC AACAGCGTGG GCATGCCCGA CGCCTGGGCC AACTGGAAAG GCACCTGGGA AGACCTGGCC AGCAAGTACG GCCTCAAACA CAGCGACACC GACATGAGCT CGGCCCAGGA ACTGGCCAAG TTCGAAGCCG AGAAGGACAA CGCCAGCGCC GACATCGGTG ACGTGGGTGC CGCCTTCGGC CCGATCGCGG TGACCAAGGG CGTCAGCCAG CCTTACAAGC CAAGCACCTG GGACCAGGTG CCGGAATGGG CCAAGGACAA GGACGGCCAC TGGGCGCTGG CCTATACCGG CACCATCGCT TTCATCATCA ACAAGGACCT GGTCAAGGAA GAGGAACGGC CGAAAACCTG GCATGACCTG GAAAAAGGCA AGTACAAGGT CGCTATTGGC GACGTCGGCA CAGCAGCCCA GGCCGCCAAC GGTGTGCTGG CTGCGGCCAT CGCCTACAAA GGTGACGAAT CCAACGTGGC GCCAGGCCTG CAGCTGTTCA CCAAGCTGGC GCAGCAGAAG CGCCTTTCGC TGGCCAACCC GACCATCCAG ACGCTGGAGA AGGGCGAGGT GGAAGTTGGC GTGGTGTGGG ACTTCAACGG CCTGAGCTAC CGTGAACAGA TCGACCCAAA ACGTTTTGAA GTGCTGATCC CCTCGGATGG TTCGGTGATT TCCGGCTATA CCACGGTCAT CAACAAGTAC GCCAAGCACC CCAACGCGGC CAAGCTGACC CGTGAATACA TCTTCAGCGA CGCCGGGCAG ATCAACCTGG CCAAGGGCCA TGCACGGCCG ATCCGGGCCG AGCACCTGAA GCTGCCGGCG GATGTGCAGG CCAAGCTGCT GCCCAACGAC CAGTACGGTG CCGCCCAGCC GATCAAGAAT GCCGAAGCCT GGGAAGCCAC CTCGAAGAAA CTGCCGCAGA TGTGGCAGGA GCAGGTGATC ATCGAGATGG AGTAA
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Protein sequence | MKKFFMASLL GSAIALCTTA MAAGTDLKAL EDAARKEGTV NSVGMPDAWA NWKGTWEDLA SKYGLKHSDT DMSSAQELAK FEAEKDNASA DIGDVGAAFG PIAVTKGVSQ PYKPSTWDQV PEWAKDKDGH WALAYTGTIA FIINKDLVKE EERPKTWHDL EKGKYKVAIG DVGTAAQAAN GVLAAAIAYK GDESNVAPGL QLFTKLAQQK RLSLANPTIQ TLEKGEVEVG VVWDFNGLSY REQIDPKRFE VLIPSDGSVI SGYTTVINKY AKHPNAAKLT REYIFSDAGQ INLAKGHARP IRAEHLKLPA DVQAKLLPND QYGAAQPIKN AEAWEATSKK LPQMWQEQVI IEME
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