Gene Pput_3993 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_3993 
Symbol 
ID5195278 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp4502121 
End bp4503185 
Gene Length1065 bp 
Protein Length354 aa 
Translation table11 
GC content62% 
IMG OID640588466 
ProductABC-type Fe3+ transport system periplasmic component-like protein 
Protein accessionYP_001269301 
Protein GI148549199 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1840] ABC-type Fe3+ transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.249752 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.268451 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAGT TCTTCATGGC GTCACTGCTT GGTTCGGCCA TCGCGTTGTG CACCACGGCC 
ATGGCCGCCG GCACTGACCT CAAGGCCCTG GAAGACGCCG CCCGCAAGGA AGGCACTGTC
AACAGCGTGG GCATGCCCGA CGCCTGGGCC AACTGGAAAG GCACCTGGGA AGACCTGGCC
AGCAAGTACG GCCTCAAACA CAGCGACACC GACATGAGCT CGGCCCAGGA ACTGGCCAAG
TTCGAAGCCG AGAAGGACAA CGCCAGCGCC GACATCGGTG ACGTGGGTGC CGCCTTCGGC
CCGATCGCGG TGACCAAGGG CGTCAGCCAG CCTTACAAGC CAAGCACCTG GGACCAGGTG
CCGGAATGGG CCAAGGACAA GGACGGCCAC TGGGCGCTGG CCTATACCGG CACCATCGCT
TTCATCATCA ACAAGGACCT GGTCAAGGAA GAGGAACGGC CGAAAACCTG GCATGACCTG
GAAAAAGGCA AGTACAAGGT CGCTATTGGC GACGTCGGCA CAGCAGCCCA GGCCGCCAAC
GGTGTGCTGG CTGCGGCCAT CGCCTACAAA GGTGACGAAT CCAACGTGGC GCCAGGCCTG
CAGCTGTTCA CCAAGCTGGC GCAGCAGAAG CGCCTTTCGC TGGCCAACCC GACCATCCAG
ACGCTGGAGA AGGGCGAGGT GGAAGTTGGC GTGGTGTGGG ACTTCAACGG CCTGAGCTAC
CGTGAACAGA TCGACCCAAA ACGTTTTGAA GTGCTGATCC CCTCGGATGG TTCGGTGATT
TCCGGCTATA CCACGGTCAT CAACAAGTAC GCCAAGCACC CCAACGCGGC CAAGCTGACC
CGTGAATACA TCTTCAGCGA CGCCGGGCAG ATCAACCTGG CCAAGGGCCA TGCACGGCCG
ATCCGGGCCG AGCACCTGAA GCTGCCGGCG GATGTGCAGG CCAAGCTGCT GCCCAACGAC
CAGTACGGTG CCGCCCAGCC GATCAAGAAT GCCGAAGCCT GGGAAGCCAC CTCGAAGAAA
CTGCCGCAGA TGTGGCAGGA GCAGGTGATC ATCGAGATGG AGTAA
 
Protein sequence
MKKFFMASLL GSAIALCTTA MAAGTDLKAL EDAARKEGTV NSVGMPDAWA NWKGTWEDLA 
SKYGLKHSDT DMSSAQELAK FEAEKDNASA DIGDVGAAFG PIAVTKGVSQ PYKPSTWDQV
PEWAKDKDGH WALAYTGTIA FIINKDLVKE EERPKTWHDL EKGKYKVAIG DVGTAAQAAN
GVLAAAIAYK GDESNVAPGL QLFTKLAQQK RLSLANPTIQ TLEKGEVEVG VVWDFNGLSY
REQIDPKRFE VLIPSDGSVI SGYTTVINKY AKHPNAAKLT REYIFSDAGQ INLAKGHARP
IRAEHLKLPA DVQAKLLPND QYGAAQPIKN AEAWEATSKK LPQMWQEQVI IEME