| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_3992 |
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| Symbol | |
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| ID | 5194705 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 4501080 |
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| End bp | 4501793 |
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| Gene Length | 714 bp |
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| Protein Length | 237 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640588465 |
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| Product | GntR family transcriptional regulator |
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| Protein accession | YP_001269300 |
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| Protein GI | 148549198 |
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| COG category | [K] Transcription |
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| COG ID | [COG2188] Transcriptional regulators |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.204883 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.364758 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGTCGA CGCCCCCGCG TGCGGTAACA GCCATCTGCC ATGCCCTGCA GGAGCAGATC
GAGCATGGCC TGCTGGCGCC GGGCGGCAAG CTGCCGGCCG AGCGGCGGCT CAGCGAGGTG
TTCGACACCA CGCGCATTAC CCTGCGTGAG GCGTTGGTGC AGCTGGAGGC CCAAGGCTTG
ATTTACCGCG AAGAGCGCCG AGGCTGGTTC GTTGCGCCGC AACGCTTGAC CTACGACCTC
ATCGAGCGCA GCCATTTCCA TGCCATGGTG CGCGATCAGG GGCGGGTGGC CAGTACCGAA
CTGCTGTCGG CGAGGCTGCA GCCGGCTTCG GCGGCCATCT GCGCACGCTT GCAGCTGCCG
GCGTTGTCCA GCGTGGTGCG CGTCTGCCGG TTACGGCGGA TTGACGGGCG GGCGGTGCTG
TATGCCGAGC ATTACCTGAA CCCCCGGTAC TTTCCAGGCA TTCTCGAACA CGACCTGGCG
CAGTCACTGA CCGAGATTTA TGGGCGGGTG TATGGCATCG AGTACGGGCA GGTGTGCTTC
GAGATCCTGC CGACAGCGTT GCCGGTGGAG GCGGCAAGCG CTTTGAAAGT GTCGGCGGGC
AGCCCGGGGT TGCACATTAC CCGGGTCAAC AGCGACCAGC ATGGGCACTT GATCGACTGT
GACCTCGAGT ATTGGCGGCA TGATGCGATC CGCATTCGGG CCCAGGCGGG ATGA
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| Protein sequence | MQSTPPRAVT AICHALQEQI EHGLLAPGGK LPAERRLSEV FDTTRITLRE ALVQLEAQGL
IYREERRGWF VAPQRLTYDL IERSHFHAMV RDQGRVASTE LLSARLQPAS AAICARLQLP
ALSSVVRVCR LRRIDGRAVL YAEHYLNPRY FPGILEHDLA QSLTEIYGRV YGIEYGQVCF
EILPTALPVE AASALKVSAG SPGLHITRVN SDQHGHLIDC DLEYWRHDAI RIRAQAG
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