Gene Pput_3986 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_3986 
Symbol 
ID5190208 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp4495236 
End bp4496048 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content59% 
IMG OID640588459 
Productseptum site-determining protein MinD 
Protein accessionYP_001269294 
Protein GI148549192 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG2894] Septum formation inhibitor-activating ATPase 
TIGRFAM ID[TIGR01968] septum site-determining protein MinD 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.346846 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.384897 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGCCAAGA TTCTCGTGGT TACTTCCGGC AAGGGGGGTG TGGGCAAGAC CACTACCAGC 
GCCGCCATTG GTACCGGCCT CGCACTGCGC GGCCACAAGA CCGTCATTGT CGACTTCGAC
GTGGGCCTGC GTAACCTCGA CCTGATCATG GGCTGCGAAC GCCGCGTGGT GTACGACTTC
GTCAACGTGG TCAACGGCGA AGCCAACCTG CAACAGGCCC TGATCAAGGA CAAGCGCCTC
GAGAACCTGT ACGTGCTGGC CGCCAGCCAG ACCCGTGACA AGGACGCGCT GACCCAGGAA
GGCGTGGAAA AGGTACTGAT GGACCTGAAG AAGGACTTCG AGTACGTCAT CTGCGACTCG
CCGGCCGGTA TCGAAAAAGG TGCTCACCTG GCCATGTACT TCGCTGACGA AGCCATCGTG
GTGACCAACC CGGAGGTTTC GTCGGTACGT GACTCCGACC GCATGCTGGG TATTCTGTCG
AGCAAGTCGC GCCGCTCCGA AAACGGTGAA GAGCCGATCA AGGAGCATTT GCTGATCACC
CGCTACCACC CGGAGCGCGT CGTCAAAGGC GAAATGCTGA GCGTGGCCGA CGTGGAAGAA
ATCCTGTCGA TCAAACTCAA GGGTGTGATC CCGGAATCGC AGGCCGTCCT CAAGGCGTCC
AACCAAGGTA TCCCGGTCAT TCTCGATGAC CAGAGCGATG CCGGCCAGGC CTACAGTGAT
GCGGTCGACC GCCTGCTGGG CAAAGAGAAG CCGATGCGCT TCATCGATGT ACAGAAGAAG
GGATTCTTCG AGCGCATTTT CGGGAGCAAA TAA
 
Protein sequence
MAKILVVTSG KGGVGKTTTS AAIGTGLALR GHKTVIVDFD VGLRNLDLIM GCERRVVYDF 
VNVVNGEANL QQALIKDKRL ENLYVLAASQ TRDKDALTQE GVEKVLMDLK KDFEYVICDS
PAGIEKGAHL AMYFADEAIV VTNPEVSSVR DSDRMLGILS SKSRRSENGE EPIKEHLLIT
RYHPERVVKG EMLSVADVEE ILSIKLKGVI PESQAVLKAS NQGIPVILDD QSDAGQAYSD
AVDRLLGKEK PMRFIDVQKK GFFERIFGSK