| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_3982 |
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| Symbol | |
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| ID | 5190424 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 4491103 |
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| End bp | 4491930 |
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| Gene Length | 828 bp |
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| Protein Length | 275 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640588455 |
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| Product | VacJ family lipoprotein |
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| Protein accession | YP_001269290 |
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| Protein GI | 148549188 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2853] Surface lipoprotein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.0949858 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.740896 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGTTAACA AACTCCTCTT CGCCACTGCC CTGCTTGCCG CTGGCCACAC CCTGGCCGCC
GAAACCGCAC CCAGAGCCAG CGTGGTCGAG GCCGACCCGC AGGTGATCGG CACGGCGCCA
CTGGCGCCCG AAGCCGATGG CTTCCTCGAC CCGCTGCGTG AGCTGAAATT CAACCCGGGG
CTGGACCAGC GCGAGTTCGA GCGCTCAACC CTGCAGGCGC TCAACGTGTA CGACCCGCTG
GAGTCGATCA ACCGGCGCAT CTACCACTTC AACTACCGAT TGGACCAATG GGTGCTGCTG
CCGCTGGTGA ATGGCTATCA GTATGTAACC CCAAAGTTCG TGCGCACGGG GGTGAGCAAC
TTCTTCAACA ACCTTGGCGA TGTGCCGAAC CTGTTCAACA GCGTGTTGCA GCTCAAAGCC
AAGCGCTCGG CAGAAATCAC TGCGCGACTG ATGTTCAACA CGATTATCGG CGTGGGTGGG
CTGTGGGACC CGGCGACCAG CATGGGCCTG CCGCGCCAGA GCGAGGACTT TGGCCAGACC
CTGGGCTTCT ATGGCGTGCC GGATGGGCCG TACCTGATGC TGCCGGTGCT AGGCCCATCG
AACCTGCGCG ATACCACCGG GCTGGTGGTG GACTATGCGG GAGAGCAGGC GGTCAACTAC
CTGAACGTGG CCGAAGCCAG CACCGATCAC CCGGAAATCT TCGCCCTGCG TGTGGTGGAC
AAGCGCTACA CCACCAACTT CCGTTACGGC CAGCTGAATT CGCCGTTCGA ATATGAAAAG
GTGCGGTATG TGTATACCCA GGCGCGCAAG TTGCAGATAG CCGAGTAA
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| Protein sequence | MVNKLLFATA LLAAGHTLAA ETAPRASVVE ADPQVIGTAP LAPEADGFLD PLRELKFNPG
LDQREFERST LQALNVYDPL ESINRRIYHF NYRLDQWVLL PLVNGYQYVT PKFVRTGVSN
FFNNLGDVPN LFNSVLQLKA KRSAEITARL MFNTIIGVGG LWDPATSMGL PRQSEDFGQT
LGFYGVPDGP YLMLPVLGPS NLRDTTGLVV DYAGEQAVNY LNVAEASTDH PEIFALRVVD
KRYTTNFRYG QLNSPFEYEK VRYVYTQARK LQIAE
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