| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_3964 |
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| Symbol | |
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| ID | 5190957 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 4471876 |
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| End bp | 4473663 |
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| Gene Length | 1788 bp |
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| Protein Length | 595 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640588437 |
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| Product | asparagine synthase (glutamine-hydrolyzing) |
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| Protein accession | YP_001269272 |
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| Protein GI | 148549170 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0367] Asparagine synthase (glutamine-hydrolyzing) |
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| TIGRFAM ID | [TIGR01536] asparagine synthase (glutamine-hydrolyzing)
[TIGR03104] asparagine synthase family amidotransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.414023 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.0298068 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGCGGAT TAGCAGGAGA GTTACGTTTC ACCCCCATCG ACCAAGCCCC TCGCCCAGCC
GACCTGGCTG CGGTAGAGCG CATTACCCAT CACCTGGCCC CGCGTGGCCC GGATGCCTGG
GGCTTCCATA GCCAGGGGCC GATTGCCCTT GGCCACCGGC GGTTGAAGAT CATGGACCTG
TCCGACGGCT CGGCGCAGCC GATGGTCGAC AACACCCTAG GCCTGTCGCT GGCCTTCAAC
GGCGCCATCT ACAACTTCCC CGAGCTGCGC CAGGAACTGC AAGACCTGGG TTACCAGTTC
TGGTCCGATG GCGACACCGA GGTGCTGCTC AAGGGCTACC ACGCCTGGGG CGCGGCGCTG
CTGCCCAAGC TCAACGGCAT GTTTGCCCTG GCCATCTGGG AGCGCGACAA CCAGCGCCTG
TTCCTGGCCC GCGACCGCCT GGGCGTCAAA CCCCTGTACC TGTCGCGCAA CGGCGAGCGC
CTGCGCTTTG CCTCGACCCT GCCGGCACTG CTCAAGGGCG GCGACATCGA CCCGATGCTC
GACCCGGTGG CCCTCAACCA CTACCTGAAC TTCCACGCCG TGGTACCGGC ACCGCGCACC
CTGCTGGCCA ATGTGCAGAA GCTGGAGCCC GGCACCTGGA TGCGCATCGA CTGCCATGGC
GAAGTGGAAC GCCAGACCTG GTGGCAGCTG AAGTACGGCC CCCACCCCGA CGAGCGTGAA
CTTGATCTGG AAGGCTGGAC CACCCGCGTA CTCGACGCCA CCCGCGACGC CGTAGCCATC
CGCCAACGGG CAGCCGTCGA TGTGGGTGTG TTGCTGTCCG GCGGTGTCGA TTCCAGCCTG
CTGGTCGGCT TGCTGCGCGA AGTGGGCGTT GACGACCTGT CGACCTTCTC CATCGGCTTT
GAAGATGCCG GCGGCGAGCG TGGCGACGAG TTCCAGTATT CGGACCTGAT CGCCAAACAC
TACGGCACCC GTCACCACCA GTTGCGCATT GCCGAACACG AAATCATCGA CCAACTGCCG
GCCGCCTTCC GCGCCATGAG CGAGCCGATG GTCAGCCACG ACTGCATCGC GTTCTACCTG
CTGTCGCGGG AAGTGGCCAA ACACTGCAAA GGCGTACAGA GCGGCCAGGG TGCCGATGAG
CTGTTCGCCG GTTACCACTG GTACCCGCAG GTGGACGGCG CCGACGATGC CTATGCGGCC
TACCGTGACG CCTTCTTCGA CCGCAGCCAT GCCGAATACC GCGAAACCGT GCAGGCGCCC
TGGCTGCTGG AAACCGACGC TGCCGGCGAC TTCGTGCGCG AACACTTCGC GCGCCCCGGC
GCACCGGCTG CCGTGGACAA GGCGCTGCGC CTGGACAGCA CCGTGATGCT GGTCGACGAC
CCGGTCAAGC GGGTGGACAA CATGACCATG GCCTGGGGCC TGGAGGCGCG TACGCCGTTC
CTCGATTACC GCCTGGTGGA ACTGTCGGCA CGCATTCCCG CCCGCTTCAA GCTGCCCGAC
GGCGGCAAGC AGGTGCTCAA GCAGGCGGCG CGACGGGTGA TCCCGCATGA GGTGATCGAC
CGCAAGAAGG GTTACTTCCC GGTACCGGGC CTGAAGCATC TGGAAGGTGC CACCTTGGGC
TGGGTACGCG AACTGTTGAC CGACCCCAGC CAGGACCGAG GGTTGTTCAA CCCGGCCATG
CTCGACCGCC TGCTGAGCAA CCCACACGGC CAGCTGACGC CATTGCGCGG CTCCAAGCTG
TGGCAACTGG CGGCGCTGAA CCTGTGGCTG AGCGAACAAG GAATCTGA
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| Protein sequence | MCGLAGELRF TPIDQAPRPA DLAAVERITH HLAPRGPDAW GFHSQGPIAL GHRRLKIMDL
SDGSAQPMVD NTLGLSLAFN GAIYNFPELR QELQDLGYQF WSDGDTEVLL KGYHAWGAAL
LPKLNGMFAL AIWERDNQRL FLARDRLGVK PLYLSRNGER LRFASTLPAL LKGGDIDPML
DPVALNHYLN FHAVVPAPRT LLANVQKLEP GTWMRIDCHG EVERQTWWQL KYGPHPDERE
LDLEGWTTRV LDATRDAVAI RQRAAVDVGV LLSGGVDSSL LVGLLREVGV DDLSTFSIGF
EDAGGERGDE FQYSDLIAKH YGTRHHQLRI AEHEIIDQLP AAFRAMSEPM VSHDCIAFYL
LSREVAKHCK GVQSGQGADE LFAGYHWYPQ VDGADDAYAA YRDAFFDRSH AEYRETVQAP
WLLETDAAGD FVREHFARPG APAAVDKALR LDSTVMLVDD PVKRVDNMTM AWGLEARTPF
LDYRLVELSA RIPARFKLPD GGKQVLKQAA RRVIPHEVID RKKGYFPVPG LKHLEGATLG
WVRELLTDPS QDRGLFNPAM LDRLLSNPHG QLTPLRGSKL WQLAALNLWL SEQGI
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