| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_3951 |
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| Symbol | |
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| ID | 5192018 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 4455187 |
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| End bp | 4455927 |
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| Gene Length | 741 bp |
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| Protein Length | 246 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640588424 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_001269259 |
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| Protein GI | 148549157 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.010229 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.00832612 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTTCGACT ACACCGCCCG CCCCGACCTG CTGCAAGGCC GGGTCATCCT GGTTACCGGT
GCCGGCCGTG GCATTGGTGC CGCGGCTGCC AGGGCCTATG CCGCACTGGG TGCCACCGTG
CTGCTGCTGG GCAAGACCGA GGCCAACCTG AACGAGGTCT ACGACCAGAT CGAAGCCGCC
GGCCACCCAC AGCCGGTCGT CATCCCGTTC AACCTGGAAA CCGCCCTGCC ACACCAGTAC
GACGAGCTGG CGGCCATGAT CGAAGGCCAG TTCGGCCGCC TCGATGGCCT GCTCAACAAT
GCGTCGATCA TCGGCCCGCG TACGCCGCTG GAACAGCTGT CGGGCGACAA CTTCATGCGC
GTGATGCACA TCAACGTCAA TGCCACCTTC ATGCTCACCA GCACCCTGCT GCCGCTGCTG
AAGCTGTCGG AAGACGCTTC GGTGGTGTTC ACCAGCAGCA GCGTCGGGCG CAAGGGCCGG
GCTTACTGGG GCGCCTATGG CGTGTCGAAG TTCGCCACCG AAGGCCTGAT GCAGACCCTG
GCCGATGAAC TGGAAGGCGT GGCGCCGGTG CGCGCCAACA GCATCAACCC AGGCGCCACG
CGCACGGCAA TGCGGGCCCA GGCCTACCCT GGCGAGAACC CGCAGAACAA CCCGCTGCCC
GAAGAGATCA TGCCGGTGTA CCTGTACCTG ATGGGGCCAG ACAGCACAGG GGTGAACGGG
CAGGCGTTCA ACGCCCAATA A
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| Protein sequence | MFDYTARPDL LQGRVILVTG AGRGIGAAAA RAYAALGATV LLLGKTEANL NEVYDQIEAA
GHPQPVVIPF NLETALPHQY DELAAMIEGQ FGRLDGLLNN ASIIGPRTPL EQLSGDNFMR
VMHINVNATF MLTSTLLPLL KLSEDASVVF TSSSVGRKGR AYWGAYGVSK FATEGLMQTL
ADELEGVAPV RANSINPGAT RTAMRAQAYP GENPQNNPLP EEIMPVYLYL MGPDSTGVNG
QAFNAQ
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