Gene Pput_3949 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_3949 
Symbol 
ID5190574 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp4453717 
End bp4454415 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content64% 
IMG OID640588422 
Product3-demethylubiquinone-9 3-methyltransferase 
Protein accessionYP_001269257 
Protein GI148549155 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2227] 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase 
TIGRFAM ID[TIGR01983] ubiquinone biosynthesis O-methyltransferase 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.00452266 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0302909 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAACG TCGACCGCGC CGAAATCGCC AAGTTCGAAG CGCTGGCCCA CCGCTGGTGG 
GACCGCGAAA GCGAGTTCAA GCCGCTGCAC GAAATCAACC CGCTGCGCGT CAACTGGATC
GACGAGCGCG TCAGCCTGGC CGGCAAGAAA GTGCTGGACG TGGGTTGCGG TGGCGGCATC
CTCAGCGAAG CCATGGCCCT GCGCGGCGCC ACGGTCACCG GTATCGACAT GGGCGAGGCG
CCACTGGCGG TGGCTCAGCT GCACCAGCTG GAGTCCGGCG TGCAGGTGGA ATACCGGCAG
ATCACCGCCG AAGCCCTGGC CGAGGAAATG CCCGAACAGT TCGACGTGGT CACCTGCCTG
GAAATGCTCG AGCACGTGCC CGACCCGTCT TCGGTGATCC GCGCCTGCTA CCGCATGGTC
AAGCCGGGCG GCCAGGTGTT CTTCTCCACC ATCAACCGCA ACCCCAAGGC CTACCTGCTG
GCCATCGTCG GCGCCGAGTA CATCCTGAAG ATGCTGCCGC GCGGCACCCA TGACTTCAAG
AAATTCATCC GCCCATCCGA GCTGGGCGCC TGGAGCCGCG ATGCAGGCCT GCAGGTGAAG
GACATCATCG GCCTCACCTA CAACCCGCTG ACCAAGCACT ACAAGCTCAA CAGCGACGTC
GACGTCAACT ACATGATCCA GACCCTGCGC GAGGAATAA
 
Protein sequence
MSNVDRAEIA KFEALAHRWW DRESEFKPLH EINPLRVNWI DERVSLAGKK VLDVGCGGGI 
LSEAMALRGA TVTGIDMGEA PLAVAQLHQL ESGVQVEYRQ ITAEALAEEM PEQFDVVTCL
EMLEHVPDPS SVIRACYRMV KPGGQVFFST INRNPKAYLL AIVGAEYILK MLPRGTHDFK
KFIRPSELGA WSRDAGLQVK DIIGLTYNPL TKHYKLNSDV DVNYMIQTLR EE