Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_3949 |
Symbol | |
ID | 5190574 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | + |
Start bp | 4453717 |
End bp | 4454415 |
Gene Length | 699 bp |
Protein Length | 232 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640588422 |
Product | 3-demethylubiquinone-9 3-methyltransferase |
Protein accession | YP_001269257 |
Protein GI | 148549155 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG2227] 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase |
TIGRFAM ID | [TIGR01983] ubiquinone biosynthesis O-methyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.00452266 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.0302909 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCAACG TCGACCGCGC CGAAATCGCC AAGTTCGAAG CGCTGGCCCA CCGCTGGTGG GACCGCGAAA GCGAGTTCAA GCCGCTGCAC GAAATCAACC CGCTGCGCGT CAACTGGATC GACGAGCGCG TCAGCCTGGC CGGCAAGAAA GTGCTGGACG TGGGTTGCGG TGGCGGCATC CTCAGCGAAG CCATGGCCCT GCGCGGCGCC ACGGTCACCG GTATCGACAT GGGCGAGGCG CCACTGGCGG TGGCTCAGCT GCACCAGCTG GAGTCCGGCG TGCAGGTGGA ATACCGGCAG ATCACCGCCG AAGCCCTGGC CGAGGAAATG CCCGAACAGT TCGACGTGGT CACCTGCCTG GAAATGCTCG AGCACGTGCC CGACCCGTCT TCGGTGATCC GCGCCTGCTA CCGCATGGTC AAGCCGGGCG GCCAGGTGTT CTTCTCCACC ATCAACCGCA ACCCCAAGGC CTACCTGCTG GCCATCGTCG GCGCCGAGTA CATCCTGAAG ATGCTGCCGC GCGGCACCCA TGACTTCAAG AAATTCATCC GCCCATCCGA GCTGGGCGCC TGGAGCCGCG ATGCAGGCCT GCAGGTGAAG GACATCATCG GCCTCACCTA CAACCCGCTG ACCAAGCACT ACAAGCTCAA CAGCGACGTC GACGTCAACT ACATGATCCA GACCCTGCGC GAGGAATAA
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Protein sequence | MSNVDRAEIA KFEALAHRWW DRESEFKPLH EINPLRVNWI DERVSLAGKK VLDVGCGGGI LSEAMALRGA TVTGIDMGEA PLAVAQLHQL ESGVQVEYRQ ITAEALAEEM PEQFDVVTCL EMLEHVPDPS SVIRACYRMV KPGGQVFFST INRNPKAYLL AIVGAEYILK MLPRGTHDFK KFIRPSELGA WSRDAGLQVK DIIGLTYNPL TKHYKLNSDV DVNYMIQTLR EE
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