| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_3947 |
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| Symbol | |
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| ID | 5190584 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 4449408 |
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| End bp | 4452167 |
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| Gene Length | 2760 bp |
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| Protein Length | 919 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640588420 |
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| Product | DNA gyrase subunit A |
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| Protein accession | YP_001269255 |
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| Protein GI | 148549153 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0188] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit |
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| TIGRFAM ID | [TIGR01063] DNA gyrase, A subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00094025 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.0304017 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCGAAC TGGCCAAAGA AATCCTCCCG GTCAATATCG AAGACGAACT GAGACAGTCT
TACCTCGACT ACGCGATGAG CGTGATTGTC GGGCGAGCGC TGCCCGATGC GCGTGACGGC
TTGAAGCCCG TGCATCGCCG CGTTCTCTAT GCGATGAGCG AACTGGGCAA CGACTGGAAC
AAGCCGTACA AGAAATCCGC CCGTGTGGTC GGTGACGTGA TCGGTAAGTA CCACCCGCAC
GGCGACACTG CGGTCTACGA CACCATCGTG CGTATGGCCC AGCCGTTCTC GTTGCGCTAC
CTGCTGGTCG ACGGCCAGGG CAACTTCGGT TCGGTGGACG GCGATAACGC TGCTGCCATG
CGATACACCG AAGTGCGCAT GACCAAACTG GCCCACGAAC TGCTGGCTGA CCTGCACAAG
GAAACCGTCG ACTGGGTGCC CAACTACGAC GGCACCGAGC AGATCCCGGC GGTCATGCCG
ACGCGTATTC CCAACCTGCT GGTCAACGGC TCCAGCGGTA TTGCCGTGGG CATGGCGACC
AATATCCCGC CGCACAACCT CGGCGAGGTC ATCGATGGCT GCCTGGCGCT CATCGACAAC
CCGGAAGTCA CCATCGATGA GCTGATGCAG TTCATCCCTG GCCCGGACTT CCCGACTGCC
GGCATCATCA ACGGTCGCCA GGGCATCATC GAGGCCTATC GCACCGGCCG TGGCCGCATC
TACATGCGCG CCCGCTCCGA GATCGAAGAC ATCGACAAGG TTGGCGGCCG CCAGCAGATC
GTGATCACCG AGCTGCCGTA CCAGCTGAAC AAGGCGCGCC TGATCGAAAA GATCGCCGAG
CTGGTCAAAG AGAAGAAGAT CGAAGGCATC ACCGAGCTGC GCGACGAGTC CGACAAGGAC
GGCATGCGCA TCGTCATCGA GCTGCGTCGC GGCGAGGTGC CGGAGGTAGT GCTCAACAAC
CTCTACCAGC AAACCCAGCT GCAGAGCGTA TTCGGCATCA ACGTGGTGGC CCTGGTCGAC
GGCCGTCCGC GCCTGCTCAA CCTCAAGGAC CTGCTCGAAG CGTTCGTCCG CCACCGCCGT
GAAGTGGTGA CCCGCCGTAC CGTATTTGAG CTGCGCAAGG CCCGTGAACG CGGTCATATC
CTTGAAGGCC AGGCGGTCGC GCTGTCCAAC ATCGACCCGG TCATTGCCCT GATCAAGGCC
TCGCCGACGC CGTCCGAAGC CAAGGAAGCC CTGGTTTCCA CGCCGTGGGA ATCCAGTGCC
GTGCAGGTCA TGGTCGAGCG CGCCGGCGCC GACGCCTGCC GCCCTGAGGA CCTGCCGGAG
CAGTACGGCC TGCATGACGG CAAGTACTTC CTGTCGCCGG AACAGGCCCA GGCTATTCTC
GACCTGCGCC TGCACCGCCT GACCGGCCTG GAGCACGAGA AACTGCTGGC CGAGTACCAG
GAAATCCTCG AGCAGATCGG CGAGTTGATC CGCATCCTCA GCAGCGCCGA GCGCCTGATG
GAAGTGATTC GCGAGGAGCT GGAGGCCATC CGTGCCGAGT ACGGCGATGT GCGCCGCACC
GAAATCCTCA ATGCCAGCCA CGACCTCAAC TACGGCGACA TGATCCCGGA AGAAGAGCGC
GTGGTCACCA TCTCCCATGG TGGTTATGCC AAGACCCAGC CATTGTCCGC CTACCAGGCC
CAGCGCCGCG GCGGCAAAGG CAAGTCGGCG ACCGGCGTGA AGGACGAGGA CTACATCGAG
CACCTGCTGG TCGCCAACAG CCATGCCACC CTGTTGCTGT TCTCCAGCAA GGGCAAGGTG
TACTGGAAGA AGACCTACGA AATCCCCGAA GCGTCCCGCG CTGCCCGCGG TCGTCCGCTG
GTCAACCTGC TGCCGCTGGA GGAGGGTGAG CGCATCACCG CCATGCTGCA GATCGACCTC
GAAGCGCTGC AGCAGAACGC CGACCTCGAC GAAGAGCTGG ACGAGGCTGA TGACACCGTG
CTCGAGGGTG AGCTGGTGGA GGCCGAGGAA GTCGACGAAG AAGACGGCGA CACCCCGGAG
TGGGTTGCAG AGCCGACCGG CGCGTACATC TTCATGGCGA CCGCTTCCGG TACCGTCAAG
AAGACCCCGC TGGTGCAGTT CGCCCGTCCG CGCTCCAACG GCCTGATCGC CCTGAAGCTG
AAGGAAGGCG ACACCCTGAT TGCCGCGGCC ATCACCGATG GCGCCAAGGA AGTCATGATG
TTCTCCGACG CTGGCAAGGT CATCCGCTTT GCCGAGAGCG TCGTGCGTGA AATGGGCCGC
AACGCCCGTG GTGTGCGCGG CATGAAGCTG GGCAAAGGCC AGCGGATCAT CTCGATGCTG
ATCCCGGAGT CCGGCTCGCA GATCCTCACC GCCTCCGAGC GTGGCTTTGG CAAGCGCACC
CCGCTGTCCA AGTTCCCGCG TCGCGGACGC GGTGGCCAGG GTGTGATCGC CATGGGTACC
AAAGGGCGCA ACGGCCTGCT GATCGGGGCT ATCCAGGTGC AGGAAGGCGA GGAGATCATG
CTGATTTCCG ACCAGGGCAC GCTGGTTCGC ACCCGGGTTG GCGAGGTGTC CAGCCTGAGC
CGCAACACCC AGGGTGTTAC GCTGATCAAG CTGGCGGCCG ATGAGACACT GGTGGGCCTG
GAGCGTATCC AGGAGCCATC CGAGGACGAG CTCGATGAAG TGATCGAGGC GGACGAGGAG
GGTGTCGAAG CCGAAGCGCC AGACGAAGCT GCAGGCGCCG AAGAGGCCCC GCAAGAGTAA
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| Protein sequence | MGELAKEILP VNIEDELRQS YLDYAMSVIV GRALPDARDG LKPVHRRVLY AMSELGNDWN
KPYKKSARVV GDVIGKYHPH GDTAVYDTIV RMAQPFSLRY LLVDGQGNFG SVDGDNAAAM
RYTEVRMTKL AHELLADLHK ETVDWVPNYD GTEQIPAVMP TRIPNLLVNG SSGIAVGMAT
NIPPHNLGEV IDGCLALIDN PEVTIDELMQ FIPGPDFPTA GIINGRQGII EAYRTGRGRI
YMRARSEIED IDKVGGRQQI VITELPYQLN KARLIEKIAE LVKEKKIEGI TELRDESDKD
GMRIVIELRR GEVPEVVLNN LYQQTQLQSV FGINVVALVD GRPRLLNLKD LLEAFVRHRR
EVVTRRTVFE LRKARERGHI LEGQAVALSN IDPVIALIKA SPTPSEAKEA LVSTPWESSA
VQVMVERAGA DACRPEDLPE QYGLHDGKYF LSPEQAQAIL DLRLHRLTGL EHEKLLAEYQ
EILEQIGELI RILSSAERLM EVIREELEAI RAEYGDVRRT EILNASHDLN YGDMIPEEER
VVTISHGGYA KTQPLSAYQA QRRGGKGKSA TGVKDEDYIE HLLVANSHAT LLLFSSKGKV
YWKKTYEIPE ASRAARGRPL VNLLPLEEGE RITAMLQIDL EALQQNADLD EELDEADDTV
LEGELVEAEE VDEEDGDTPE WVAEPTGAYI FMATASGTVK KTPLVQFARP RSNGLIALKL
KEGDTLIAAA ITDGAKEVMM FSDAGKVIRF AESVVREMGR NARGVRGMKL GKGQRIISML
IPESGSQILT ASERGFGKRT PLSKFPRRGR GGQGVIAMGT KGRNGLLIGA IQVQEGEEIM
LISDQGTLVR TRVGEVSSLS RNTQGVTLIK LAADETLVGL ERIQEPSEDE LDEVIEADEE
GVEAEAPDEA AGAEEAPQE
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