| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_3945 |
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| Symbol | |
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| ID | 5191797 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 4447012 |
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| End bp | 4448106 |
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| Gene Length | 1095 bp |
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| Protein Length | 364 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640588418 |
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| Product | chorismate mutase |
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| Protein accession | YP_001269253 |
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| Protein GI | 148549151 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0077] Prephenate dehydratase
[COG1605] Chorismate mutase |
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| TIGRFAM ID | [TIGR01807] chorismate mutase domain of proteobacterial P-protein, clade 2 |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.117888 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.0191313 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGAAC AGGAGCTCAA GGCGCTGCGC GTGCGCATCG ACAGCCTCGA CGAGAAAATC
CTCGAGCTGA TCAGCGACCG CGCCCGCTGC GCCGAAGAAG TAGCCCGGGT CAAGACGGCC
TCGCTGAAGG AAGGCGAGAA GCCGGTGTTC TACCGTCCCG AGCGTGAAGC TGCGGTGCTC
AAGCGCGTGA TGGAGCGCAA CAAGGGCCCG CTGGGCAACG AAGAGATGGC GCGGCTGTTC
CGCGAAATCA TGTCGTCGTG CCTGGCCCTT GAAGAGCCGC TGAAAATCGC CTACCTCGGC
CCTGAAGGCA CCTTCACCCA GGCGGCGGCC ATGAAGCACT TCGGCCACGC GGTGATCAGT
CGGCCGATGG CGGCCATCGA CGAAGTGTTC CGTGAGGTGG CGGCCGGTGC CGTCAACTTC
GGTGTGGTGC CGGTGGAAAA CTCCACTGAA GGTGCGGTCA GCCACACCCT GGACAGCTTC
CTCGAGCATG ACATGGTGAT TTGCGGTGAG GTCGAGCTGC GTATCCACCA CCACCTGCTG
GTGGGCGAGA ATACCAAGAC CGACAGCATC ACCCGCATCT ACTCCCACGC CCAGTCGCTG
GCCCAGTGCC GAAAGTGGCT GGACGCGCAC TACCCGAACG TGGAGCGCGT GGCCGTATCG
AGCAATGCCG AAGCGGCCAA GCGGGTCAAG GGCGAGTGGA ACTCGGCGGC GATCGCCGGC
GATATGGCGG CCAACCTGTA CGGCCTGACC CGTCTGGCCG AGAAGATCGA AGACCGCCCG
GACAACTCCA CGCGCTTCCT GATGATCGGT AACCAGGAAG TACCGCCGAC CGGCGACGAC
AAGACCTCGA TCATCGTTTC GATGAGCAAC AAGCCAGGTG CGTTGCATGA GTTGCTGGTG
CCGTTCTATC AGAACGGCAT CGACCTGACC CGCATCGAAA CCCGCCCGTC GCGCAGCGGC
AAGTGGACCT ACGTGTTCTT CATCGACTTC GTCGGTCACC ACCGCGATCC GCTGATCAAG
GCGGTGCTCG AGCAGATCAG CCAGGAGGCT GTGGCGCTGA AGGTGCTGGG CTCGTATCCG
AAGGCGGTGC TTTGA
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| Protein sequence | MSEQELKALR VRIDSLDEKI LELISDRARC AEEVARVKTA SLKEGEKPVF YRPEREAAVL
KRVMERNKGP LGNEEMARLF REIMSSCLAL EEPLKIAYLG PEGTFTQAAA MKHFGHAVIS
RPMAAIDEVF REVAAGAVNF GVVPVENSTE GAVSHTLDSF LEHDMVICGE VELRIHHHLL
VGENTKTDSI TRIYSHAQSL AQCRKWLDAH YPNVERVAVS SNAEAAKRVK GEWNSAAIAG
DMAANLYGLT RLAEKIEDRP DNSTRFLMIG NQEVPPTGDD KTSIIVSMSN KPGALHELLV
PFYQNGIDLT RIETRPSRSG KWTYVFFIDF VGHHRDPLIK AVLEQISQEA VALKVLGSYP
KAVL
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