| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_3944 |
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| Symbol | |
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| ID | 5190680 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 4444613 |
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| End bp | 4446853 |
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| Gene Length | 2241 bp |
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| Protein Length | 746 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640588417 |
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| Product | bifunctional cyclohexadienyl dehydrogenase/ 3-phosphoshikimate 1-carboxyvinyltransferase |
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| Protein accession | YP_001269252 |
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| Protein GI | 148549150 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0128] 5-enolpyruvylshikimate-3-phosphate synthase
[COG0287] Prephenate dehydrogenase |
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| TIGRFAM ID | [TIGR01356] 3-phosphoshikimate 1-carboxyvinyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.474784 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.144967 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGTAAATG CAGCAAAAAC CAAACCCGCG CCAATCATCA ACCGCCTGGT CGTGGTCGGT
CTCGGCCTGA TCGGCGGCTC GTTCGCCAAA GGCCTGCGTG AAAGCGGCCT GTGCCGCGAA
GTGGTCGGTG TCGACCTGGA TGCCCCCTCG CGCAAGCAGG CCGTGGCCCT GGGCGTGGTC
GACCGCTGCG AAGAAGACCT CGCCGCCGCT TGCGTGGGCG CCGATGTCAT TCAGCTGGCC
GTACCGATCC TGGCCATGGA AAAAGTCCTG GCCCGCCTGG CCCAGCTCGA CCTGGGTGAT
GCAATCATCA CCGACGTCGG CAGCGCCAAG GGCAACGTCG TGCGGGAAGC GCGTGCCGTC
TTCGGTGATC GCCTGCCGCG CTTCGTCCCG GGCCACCCCA TTGCCGGTTC CGAGCAGAGC
GGGGTAGAAG CCTCCAATGC CACCTTGTTC CGCCGGCACA AGGTCATCCT CACGCCGCTG
GCCGAAACCG ACCCCGCCGC GCTGGCCCTG GTTGACCGCC TGTGGCGTGC GCTGGATGCC
GATGTGGAGC ACATGTCGGT CGAGCGCCAT GACGAAGTAC TGGCCGCCAC CAGCCATCTG
CCACACTTGC TGGCCTTTGG CCTGGTCGAC TCACTGGCCA AACGCAATGA AAACCTCGAG
ATCTTCCGGT ACGCTGCGGG TGGATTCCGC GATTTCACAA GAATCGCCGG CAGCGATCCG
ACCATGTGGC ATGACATCTT CCTCGCCAAC CGCGACGCTG TCCTGCGCAC GCTTGATACA
TATCGCAGCG ATCTCGACGC CCTGCGCGAC GCGATCGCTG AAGGGGATGG GCACCAACTG
CTGGGTGTAT TCACCCGCGC ACGGGTTGCC CGCGAGCATT TCAGTAAAAT CCTGGCCCGC
CGGGCCTATG TGGACGCTAT GAACGCCAAC GATCTGATTT TCCAGGCCCA ACCGGGTGGC
CGCCTGAACG GGCGGATCCG TGTACCGGGC GACAAGTCGA TTTCCCATCG CTCGATCATG
CTCGGCTCGC TGGCCGAAGG TACTACCGAG GTCGAAGGCT TCCTCGAAGG CGAAGATGCG
CTGGCGACCC TGCAGGCATT CCGTGACATG GGTGTGGTCA TCGAAGGCCC CAACCACGGT
CGTGTGACCA TTCACGGCGT GGGCCTGCAT GGCCTCAAGC CGCCACCTGG GCCGCTGTAC
GTAGGTAACT CCGGTACTTC GATGCGCCTG CTGTCGGGCC TGTTGGCCGG TCAGTCGTTC
GATGTCACCA TGACCGGCGA CGCCTCGCTG TCCAAGCGCC CGATGAACCG TGTGGCCAAC
CCGCTGCGCG AAATGGGTGC TGTGGTCGAG ACCGGCCCGG ACGGCCGCCC GCCGCTGACC
ATCCGCGGTG GCCACAAGCT CAAAGGGCTG ACCTACACGC TGCCAATGGC TAGCGCCCAG
GTCAAATCCT GCCTGCTGCT GGCCGGCCTG TACGCCGAAG GCAAGACCAC TGTCACTGAG
CCTGCACCTA CCCGTGACCA CACCGAGCGC ATGTTGCGCG GTTTTGGCTA CTCGGTCGAC
AGCAATGGCC CGGTGGCCTC GCTGCAGTCC GGTGGCAAGC TGACCGCTAC CCGGATCGAA
GTGCCGGCTG ACATTTCCTC GGCCGCGTTC TTCCTGGTCG CAGCCTCTAT CGCTGAAGGC
TCCGAGCTGG TGCTGGAGCA TGTCGGCATC AATCCGACCC GTACCGGCGT GATCGACATC
CTGCGCCTGA TGGGCGGCGA CATCACCCTG GAAAACCAGC GTGAAGTGGG CGGCGAACCC
GTGGCCGACC TGCGTGTGCG CGGTGCCAAG TTGAAGGGTA TCGACATTCC TGAAGCGTTG
GTGCCGCTGG CCATCGACGA ATTCCCGGTA TTGTTCGTGG CTGCAGCCTG CGCTGAAGGG
CGTACCGTGC TGCGTGGCGC CGAAGAGCTG CGGGTGAAGG AGTCCGATCG CATCCAGGTG
ATGGCTGATG GCCTCACCAC CTTGGGCATC AAGTGCGAGC CGACCCCGGA CGGCATCATC
ATCGACGGCG GCCAGTTGGG CGGCGGCGAA GTGCATGGGC ATGGTGACCA CCGCATCGCC
ATGGCCTTCA GCGTGGCTTC GCTGCGCGCC AGTGCGCCAA TTCGCATTCA CGACTGCGCC
AACGTCGCCA CCTCGTTCCC CAACTTCCTG GCGCTGTGCG CCGAAGTGGG GATTCGCGTG
GCAGAAGAGG GCAAGTCGTG A
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| Protein sequence | MVNAAKTKPA PIINRLVVVG LGLIGGSFAK GLRESGLCRE VVGVDLDAPS RKQAVALGVV
DRCEEDLAAA CVGADVIQLA VPILAMEKVL ARLAQLDLGD AIITDVGSAK GNVVREARAV
FGDRLPRFVP GHPIAGSEQS GVEASNATLF RRHKVILTPL AETDPAALAL VDRLWRALDA
DVEHMSVERH DEVLAATSHL PHLLAFGLVD SLAKRNENLE IFRYAAGGFR DFTRIAGSDP
TMWHDIFLAN RDAVLRTLDT YRSDLDALRD AIAEGDGHQL LGVFTRARVA REHFSKILAR
RAYVDAMNAN DLIFQAQPGG RLNGRIRVPG DKSISHRSIM LGSLAEGTTE VEGFLEGEDA
LATLQAFRDM GVVIEGPNHG RVTIHGVGLH GLKPPPGPLY VGNSGTSMRL LSGLLAGQSF
DVTMTGDASL SKRPMNRVAN PLREMGAVVE TGPDGRPPLT IRGGHKLKGL TYTLPMASAQ
VKSCLLLAGL YAEGKTTVTE PAPTRDHTER MLRGFGYSVD SNGPVASLQS GGKLTATRIE
VPADISSAAF FLVAASIAEG SELVLEHVGI NPTRTGVIDI LRLMGGDITL ENQREVGGEP
VADLRVRGAK LKGIDIPEAL VPLAIDEFPV LFVAAACAEG RTVLRGAEEL RVKESDRIQV
MADGLTTLGI KCEPTPDGII IDGGQLGGGE VHGHGDHRIA MAFSVASLRA SAPIRIHDCA
NVATSFPNFL ALCAEVGIRV AEEGKS
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