| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_3928 |
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| Symbol | |
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| ID | 5195349 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 4427318 |
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| End bp | 4428427 |
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| Gene Length | 1110 bp |
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| Protein Length | 369 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640588401 |
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| Product | DegT/DnrJ/EryC1/StrS aminotransferase |
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| Protein accession | YP_001269236 |
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| Protein GI | 148549134 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0399] Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.0951688 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.298031 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACAACA ATCATCTCAT CCCCCTTTTC TCCGCTGAAA TAGTGAATAC TGGTATTGAT
TTCCTGTCTC CCTTGAAAAC CGTTCTGGAC AGCCACTGGT ACATCCTTGG CACTGAAGTG
AAGCAATTCG AGGAAGCGTT TGCTCGTTAT GTCGGTGTCG ACCACTGCAT AAGCGTCGCC
AATGGTTCGG AGGCACTGGA GCTCGCACTT CGCGGCCTGG GCGTTGAACA AGGCAGTCGC
GTGGTAGCGA TCGCCAACGC CGGCTTCTAT AGCAGCACCG CCATTCATGC CATTGGCGCA
GAGCCCGTCT ACGTCGATGT AGACGCAGAG ACGCTGACCA TGTGCCCCAA TGCATTGGCG
CAGGTTATCG AAAGCAAGCC TGCTGCGGTC ATCGTGACGC ACCTGTATGG GCAACTGGCC
AATATCGAAG AAATCGTTCG CATCGCTCAG GCCGCTGGCG TACCGGTCCT CGAAGACTGC
GCACAGTCCC ACGGTGCACG ACGCAATGGC CAGCAGGCCG GCAGTTTCGG TGACATCGCC
TGCTTCAGCT TCTACCCCAC GAAGAATCTC GGCGCCCTGG GTGACGGCGG CGCTGTGGTT
ACCCGCAACG ACCAGCTTGC CGCCCGCATT CGCCAGCTGC GTCAATATGG CTGGTCGCAA
AAATACCAGG TCGCCATTGC TGGCGGTCGC AACAGTCGCC TCGATGAAAT GCAGGCCGCT
ATCCTGCGCG TGAAACTTCC GCTTCTCGAT GGCTGGAACG AGCAACGCCG CTCTATCGCT
CAGCGCTACA ATGCCGCGTT CGCCTCGCTG GACCTGCAAC TGCCTGCCTC TACGGGCGAG
GACTATGTTG CTCACCTGTA CGTTGTCCGA GTCAAAGACC GCGCAGCTTT CGCTGCAGCG
CTCAAGGAAA GGCTTGTCAG CACCGATATC CACTACCCGA TCGCCGACCA CAAACAGCCT
GCCTATAACG CCACACCGCC CCAGTCGCTC GTGGTGACCG AACAGGCCTG CAGTACTGTC
ATCTCCCTGC CCTGCTTCCC GGGACTCAAA GATGAAGAAG TGAATCGGGT CATCGACGCC
GTCAAGGAAT TCTTCACCAA GGAGCATTGA
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| Protein sequence | MHNNHLIPLF SAEIVNTGID FLSPLKTVLD SHWYILGTEV KQFEEAFARY VGVDHCISVA
NGSEALELAL RGLGVEQGSR VVAIANAGFY SSTAIHAIGA EPVYVDVDAE TLTMCPNALA
QVIESKPAAV IVTHLYGQLA NIEEIVRIAQ AAGVPVLEDC AQSHGARRNG QQAGSFGDIA
CFSFYPTKNL GALGDGGAVV TRNDQLAARI RQLRQYGWSQ KYQVAIAGGR NSRLDEMQAA
ILRVKLPLLD GWNEQRRSIA QRYNAAFASL DLQLPASTGE DYVAHLYVVR VKDRAAFAAA
LKERLVSTDI HYPIADHKQP AYNATPPQSL VVTEQACSTV ISLPCFPGLK DEEVNRVIDA
VKEFFTKEH
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