Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_3920 |
Symbol | |
ID | 5192387 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 4406963 |
End bp | 4408315 |
Gene Length | 1353 bp |
Protein Length | 450 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640588393 |
Product | 8-amino-7-oxononanoate synthase |
Protein accession | YP_001269228 |
Protein GI | 148549126 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0156] 7-keto-8-aminopelargonate synthetase and related enzymes |
TIGRFAM ID | [TIGR00858] 8-amino-7-oxononanoate synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.193624 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAGCCA GAACCCCGAC CGGCCTTGGT GGTGATGCCA AGCAACGCCT GATCCAGCAA GCCCTCGCCC GGCGCCGCCA TGTGGCTGCC GAGGGCGAGC AGGGCGCCAC CCTGGAGCAG GTACAGCAGG CTGCCCTGAA GGTGCCCGAA GCGCACTATC GCTTTGATCA GCACCCGGGG TACCAGCAAC TGCGGGTAAT CCAGCAGAGT GCCATGCAGC TGGGCGTGAG CAACCCGTTC TTCCGTATGC ACCAGGGCAC CGCCGGCGCC CAGACGCAGA TTGGCGAGCG CGAGTACCTC AACTTTGCCA GTTACAACTA CCTGGGTTAC TCCGGCCACC CGACCGTGGC CGAAGCGGCC AAGGCTGCGA TTGACCGCTA CGGTACCTCG GTGTCGGCCA GCCGCCCGGT TTCTGGCGAC CGCCCGCTGC ACCGCGAGCT CGAGCGCGAA CTGGCCCGCC TGTACGAGGT GGACGATGCG GTGGTGATGG TCAGCGGCCA TGCCACCAAC GTCACCACCA TCGGCTACCT GTTCGGGCCA CGCGACCTGG TGGTGCATGA CGAGCTGATT CACAACAGCG TGTTGCAGGG TATCCAGCTG TCGGGTGCCC GCCGTCTGAG CTTTGCCCAC AACGACTGGC AGGCGCTGGA CCGCCTGCTG GGCGAGCAAC GCCAGCACTT CGAGCGGGTG CTGGTGGTGG TGGAAGGCAT CTACAGCATG GACGGTGATT ACCCTGAGCT GCCCCGGTTC GTCGAGCTCA AGCATAAGCA CAAGGTTTTC CTGATGGTGG ATGAAGCCCA TTCGCTGGGG GTGATGGGTG CGACGGGCAA AGGTATTCGT GAGCATTTTG GGTTGGCTGG CGATGACGTC GACATCTGGA TGGGGACCTT GAGCAAGACC CTGGCCAGTT GCGGTGGGTA CATTGCGGGC CGCACGGCAC TGATCGAGCA CCTGAAGTTT CTGGCGCCGG GCTTCTTGTA CAGTGTTGGC ATGCCGCCGG CGGTCACGGC CTCTGCGCTG GCAGCGTTGA AGCTGCTGGC TGCAGACAGC GAGCGGGTAG CGCAAGTGCA GGCGCGCGGG GAGCTGTTCC TGCGCCTGGC GCGTGAAGCT GGGCTGGACA CGGCGACCAG TACCGGGTTA GCGGTGATCC CGGTGATTAC CGGCAGTTCG TTCAAGGCCG GCCGTTTGTC CAGCGCCCTG TTCGAGCGTG GCATCAATGC CCAGCCGATC CTGTACCCGG CGGTGCCGGA GCATTCGGCG CGGGTGCGGT TTTTTGTGTC TTGCGAGCAT ACCGAAGAGC AGATCAGGCA TACCGTTGCG GTGGTGGCGC AGGAGATGGC GCGGCTGGGG TGA
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Protein sequence | MTARTPTGLG GDAKQRLIQQ ALARRRHVAA EGEQGATLEQ VQQAALKVPE AHYRFDQHPG YQQLRVIQQS AMQLGVSNPF FRMHQGTAGA QTQIGEREYL NFASYNYLGY SGHPTVAEAA KAAIDRYGTS VSASRPVSGD RPLHRELERE LARLYEVDDA VVMVSGHATN VTTIGYLFGP RDLVVHDELI HNSVLQGIQL SGARRLSFAH NDWQALDRLL GEQRQHFERV LVVVEGIYSM DGDYPELPRF VELKHKHKVF LMVDEAHSLG VMGATGKGIR EHFGLAGDDV DIWMGTLSKT LASCGGYIAG RTALIEHLKF LAPGFLYSVG MPPAVTASAL AALKLLAADS ERVAQVQARG ELFLRLAREA GLDTATSTGL AVIPVITGSS FKAGRLSSAL FERGINAQPI LYPAVPEHSA RVRFFVSCEH TEEQIRHTVA VVAQEMARLG
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