| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_3917 |
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| Symbol | |
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| ID | 5190220 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 4402203 |
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| End bp | 4404347 |
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| Gene Length | 2145 bp |
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| Protein Length | 714 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640588390 |
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| Product | capsule polysaccharide biosynthesis protein |
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| Protein accession | YP_001269225 |
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| Protein GI | 148549123 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3563] Capsule polysaccharide export protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.442533 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACAACA CACCTCCCTT TGTACCCCAC CCGCCCGAAG GTTACTCGCC ACCCGATGCC
CTGGTAGACA GCACCGGCTG GGTCGGCATC ATGTCGCAAT GGGTGGCCTG GAAGGTCCTG
CACCTGCCGC AGTTCCTCGG CCCGGAAGGC CCGCCCTTCT GGCTGTGGCG CCGTGGCCGC
AAGGCGCCCA AGGGGCTCAA GGCCATTGCC GGTATCGGCT ACAAGCAGTC GTCGGCCCAT
GCCAGGGTGC TGTGCCAGCG CTGGGGGCTG CCCTACATTG CGCTGGAAGA CGGCTTTTTG
CGTTCTTCTT CGCTGGGCAT CGAGGGCGAT ACGCCGATGT CCATGGTGGT CGACCCGGTA
GGCATCCACT ACCTGGCGGA CCGCCCTTCG CTGCTGGAAA ATATCCTGCA GCAGCCCGAG
GCGCTCAGCG CATACGAGCT CAATTGCGCC CGCGAACTGA TTGCCTTGAT GCGCAGCAGC
GGCATCGGCA AGTACAACAA CGCCCAGGAC CTGCCCGACG ACGACCCGCT GGGCCGTGAA
CGGCCGCTGG TGCTGGTGGT GGATCAGACT GCCGGCGATT ATTCGATCCC GGGCGGCGGG
CTATGCGAAG CCGACTATGT GCGAATGCTG GATGAGGCCC TGGCAGAAAA CCCGGATGCC
GACGTGCGCG TGCGCATTCA CCCGGACTGC CTGGGCGGGC AAAAGCCCAG TTGCCTGCTG
GATGCCGCGC GGGCCCGCGG GGTAACGCTG GAGGCGCGGC CGGTAGCCTG GGCGTCACTG
GCCCGGCGTG CCCGGCGCGT GTACGTGGGT ACCAGCCAGG CCGGGCTGGA GGCGTTGATC
CAGGGCGTGC CGGTCACCTG CTTCGGGCTG CCGTTCTACG CGGGCTGGGG GCTGACCGAT
GACCGCATGG CCATTGCTCG CCGGCAGTCA CGGCCAGACC TTGTGCAACT GGTGGCGGCG
GCCTATGTGC GTTACTGCCG TTATGTCGAC CCATTGAGCG GCCAGTTGAC CGATGCCTTG
ACCGTTGCCC GCCAATTGGC CAGCAAGAAA GCCCGCGATG CTGCGTTTGC CGGCCCCACC
ACGGTGCTGG GCGTGAAGCG GCACAAGCAG CACAACATCC GGCGTTTTTT CGCAAGCCGT
TGGGGGCAGC TGCGCTTCAG CGTGGACAGC CCGCGCCTGA TAAGCCAGGT AGCGGCCGAA
CAGGGTCGGC TGCTGGTATG GGCTGCGCGC GAGCCGGCCG GCCTGGCCGA ACGTGCGCGC
CAGGCGGGGG TGCCAGTGTG GCGGGTCGAG GATGGTTTCT TGCGCTCCAC GGGGTTGGGG
GCTACCAACA GCCCGGCACT GTCATTGGTG CTGGACCGGG GTGGCATTCA TTACGATGCG
CAGTCTGCCA GCGACCTGGA GCAGCTGTTG CAGCATGGCG AATTCGACGC CCCATGCCTG
GCCGAAGCGG CGCGCTTGCG GGCGCAGATC GTTGCCAGCG GCACCAGCAA GTTCAACCTG
CGCAGCAATG TGCGCCCGGT GCTGCTGGGG CAGCCGGGGC AGCTGCGGGT ACTGGTGGTG
GGCCAGGTCG AGGATGATGC CTCGGCGCTG TGCAGCGGTG GCGGTACCGG GTGCAACCTG
CGGCTGCTGC AACAGGTGCG CGCGCGGTTG CCGGATGCCT GGATTCTGTA CAAGCCGCAC
CCCGACGTGG AAGCCGGCAA GCGCCGCGGG CACATCGCCC CGGCACAGCT GGTGGGGCTG
GCCGATCAGG TACTGGCGGG TGTGGACATC GCCAGCCTGT ATGGCCAGGT CGATGCGCTG
CATACGCTCA GTTCCACCGC CGGTTTCGAG GCCTTGCTGC GCGGGCTGCC GGTGGTCACC
TATGGCACGC CGTTCTATGC CGGCTGGGGC CTGACCGAGG ACCATCAGCC CTTGCCCCGC
CGCACCCGGC GTTTAACCCT GGACCAGTTG GTAGCCGGCG CCTTGTTGCG CTATGCGCGC
TATGCCGACG TCCAGCAAGA CCTGCCCTGC GATGCCTGGC ACGCCCTCGC CTGCCTCAGC
GCGCCCCACC CGGCGCCGGT GGCCTATCGA CGAGTGGCGC CGTTGCTCAA CTATACCCGG
ACCATGCTCG GCTGTGGCCG GCCATTGGCC CCATCAAAGG ACTAG
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| Protein sequence | MHNTPPFVPH PPEGYSPPDA LVDSTGWVGI MSQWVAWKVL HLPQFLGPEG PPFWLWRRGR
KAPKGLKAIA GIGYKQSSAH ARVLCQRWGL PYIALEDGFL RSSSLGIEGD TPMSMVVDPV
GIHYLADRPS LLENILQQPE ALSAYELNCA RELIALMRSS GIGKYNNAQD LPDDDPLGRE
RPLVLVVDQT AGDYSIPGGG LCEADYVRML DEALAENPDA DVRVRIHPDC LGGQKPSCLL
DAARARGVTL EARPVAWASL ARRARRVYVG TSQAGLEALI QGVPVTCFGL PFYAGWGLTD
DRMAIARRQS RPDLVQLVAA AYVRYCRYVD PLSGQLTDAL TVARQLASKK ARDAAFAGPT
TVLGVKRHKQ HNIRRFFASR WGQLRFSVDS PRLISQVAAE QGRLLVWAAR EPAGLAERAR
QAGVPVWRVE DGFLRSTGLG ATNSPALSLV LDRGGIHYDA QSASDLEQLL QHGEFDAPCL
AEAARLRAQI VASGTSKFNL RSNVRPVLLG QPGQLRVLVV GQVEDDASAL CSGGGTGCNL
RLLQQVRARL PDAWILYKPH PDVEAGKRRG HIAPAQLVGL ADQVLAGVDI ASLYGQVDAL
HTLSSTAGFE ALLRGLPVVT YGTPFYAGWG LTEDHQPLPR RTRRLTLDQL VAGALLRYAR
YADVQQDLPC DAWHALACLS APHPAPVAYR RVAPLLNYTR TMLGCGRPLA PSKD
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