| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_3912 |
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| Symbol | |
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| ID | 5191652 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 4396024 |
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| End bp | 4398045 |
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| Gene Length | 2022 bp |
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| Protein Length | 673 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640588385 |
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| Product | capsule polysaccharide biosynthesis protein |
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| Protein accession | YP_001269220 |
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| Protein GI | 148549118 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3563] Capsule polysaccharide export protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACGACG CTTCGCCCCG CCCTCGCCTG CTGATCCTGT CAAAAGGAGC CCAGCGCATC
AGTACGTTGC CTGCCTTGCT GCCCGAATTC GCGCTGCAAA GCGGTGCTGT GCGCGATGTC
GAGCTCGCCG ATTGGGTAAT GGCCTGGGGC CGCAAGCCAA GCGCCATCAA GGCAATGGCC
GAGGCGCACA AGGCAGGCAA ACCCGTTCTC ACGCTGGAAG ACGGCTTCAT CCGTTCCGTG
GGCCTGGGCG CCGACGAGCC GCCCCTGTCG CTGATCGTCG ATGACGTGGG CGTGTACTAC
GACGCTTCCC AGCCGTCCCG CCTCGAACAG TTGATCGCCA CGCCCCTCGA CGCCGAGCAA
ACCCAACGTG CCCTGGCACT ACGTAGCCTG TGGCAGCAGC AACGGGTGTC GAAGTACAAC
GACGCACGCA TCGAACTGCC AGCGCTGCCG GCCGACTGCG TGCTGGTGGC CGACCAGACC
TGTGGCGATG CCTCGTTGCA AGGTGCAGGG GCCAGCGACT TCCGGGCCAT GCTGGAGGCG
GCATTGGCCC GCTACCCGCA TAGCACCATC GTGCTCAAGG TGCACCCCGA CGTGGTGGCC
GGGCGCAAGG CCGGGCACTT CGACCTGGCA GCGCTGGCCG GCAACCCGCG GGTGCAGGTA
CTGGCCCACA ATGTTCACCC GGCCGATTTG CTGCCACGCA TGCGTGCAGT GTTCGTGATG
ACGTCGCAAT TGGGCTTCGA TGCCTTGCTT TGGGACGTAC CGGTGCACAC CTGGGGCATG
CCGTTCTATG CCGGCTGGGG GCTGACCGAC GACCGCTTGC CGGCACCTTC ACGCCGCAAG
CCTGTGCCGT TGGCGCAACT GATTCATGCC AGCCTGGTGG CCTACCCGCG CTATGTCTGC
CCAGAACGTG GTCAGCCGTG TACGCCAGAG GTGCTGATCA ACTGGCTGGG CCTGCAACGG
CGGCACCGCA GCGTGTTGCC AAACACCGTA CAGATGCTGG GTTTCAGCCG CTGGAAAGAA
CCGCTGGCAA ACCTGTTTTT CAATGGCGCG GCCATTCGCT TCGTCAAGCC CGAGCAACCG
CTGGCGCAAG ACTTGCCCGT GGTGTCCTGG GGCTGCAAGC ACGACACTCA CCTTTGCGCC
CACCCACTGC CCGTCAACCG GGTGGAAGAC GGCTTTCTGC GCTCGGTCGG CCTGGGCGCC
GGCAAGGCGC GACCGTTGTC GTGGGTGGTC GATGACCTGG GTATTTACTA CGACGCCACC
CGGCCTTCGC GCCTGGAGCG CATCCTGGCT GAAGAGCCCT TCGACCCGCA GTTGTTGGCC
CGCGCGCATG CTTTGCGCCT GGCCATCTGC GCGGCGGGGC TGACCAAGTA CAACTTGCCC
GGCGCCAGCT GGCAGCGCCC CTCGCATGCG CAACGGGTGA TCCTGGTGCC TGGCCAGGTG
GAGGGCGATG CGTCCATCCG CTTTGGCGGC AACCGTATCC GCAGCAACCT GCAACTGCTG
CGCGCCGTGC GTGAGCAAAA CCCTGATGCG TGGGTGTTGT ACAAACCCCA CCCAGAGGTA
TTGGCCGGCA CGCGCGCCCG CGGTGACGAC GAAGCGCAAA CCGTGCACTG GTGCGATGAA
GTGATCGGCG ATACGCCACT GCAGCAATTG CTGGAAGTGG TCGACGAATT GCATGTGCTG
ACCTCGCAGT CGGGCTTCGA GGCCCTGCTG CGCGGTGTGC CGGTGACGAC CTATGGCCAG
CCGTTCTACG CCGGCTGGGG GCTGACCCGC GACATGGACC TTCAAGCACC GGTGCAGGCA
CGGCGCAGCC GACAACTGAC GCTGGACCAG TTGGTAGCGG GAACGCTGCT GCTCTACCCC
ACTTACGTAA GCCTGGTGAC CAACCGCTTC ACCACCGCCG AACGAACCTT ATACGAACTA
CAAAATTGGC ACGCCTTACC GCAGCCTGGA GCGCCCTCCC GATGGCAGGA CTTGAAACGA
CGCTTGAGCA GTTTGTTGGG CAGGAAGCGC CCGACCAACT GA
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| Protein sequence | MDDASPRPRL LILSKGAQRI STLPALLPEF ALQSGAVRDV ELADWVMAWG RKPSAIKAMA
EAHKAGKPVL TLEDGFIRSV GLGADEPPLS LIVDDVGVYY DASQPSRLEQ LIATPLDAEQ
TQRALALRSL WQQQRVSKYN DARIELPALP ADCVLVADQT CGDASLQGAG ASDFRAMLEA
ALARYPHSTI VLKVHPDVVA GRKAGHFDLA ALAGNPRVQV LAHNVHPADL LPRMRAVFVM
TSQLGFDALL WDVPVHTWGM PFYAGWGLTD DRLPAPSRRK PVPLAQLIHA SLVAYPRYVC
PERGQPCTPE VLINWLGLQR RHRSVLPNTV QMLGFSRWKE PLANLFFNGA AIRFVKPEQP
LAQDLPVVSW GCKHDTHLCA HPLPVNRVED GFLRSVGLGA GKARPLSWVV DDLGIYYDAT
RPSRLERILA EEPFDPQLLA RAHALRLAIC AAGLTKYNLP GASWQRPSHA QRVILVPGQV
EGDASIRFGG NRIRSNLQLL RAVREQNPDA WVLYKPHPEV LAGTRARGDD EAQTVHWCDE
VIGDTPLQQL LEVVDELHVL TSQSGFEALL RGVPVTTYGQ PFYAGWGLTR DMDLQAPVQA
RRSRQLTLDQ LVAGTLLLYP TYVSLVTNRF TTAERTLYEL QNWHALPQPG APSRWQDLKR
RLSSLLGRKR PTN
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