| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_3910 |
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| Symbol | |
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| ID | 5192418 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 4393090 |
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| End bp | 4394022 |
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| Gene Length | 933 bp |
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| Protein Length | 310 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640588383 |
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| Product | KpsF/GutQ family protein |
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| Protein accession | YP_001269218 |
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| Protein GI | 148549116 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[T] Signal transduction mechanisms |
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| COG ID | [COG0794] Predicted sugar phosphate isomerase involved in capsule formation
[COG2905] Predicted signal-transduction protein containing cAMP-binding and CBS domains |
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| TIGRFAM ID | [TIGR00393] KpsF/GutQ family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.539789 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCACC TCAGCATCGC CAAAGAAGCC CTTATCGCTC AAGCTCAAGC TGTTACTCAG
TTGGCCGACC GCCTGGATGG CGAGTTCCAG AGCGCCGTTG AACTCATCCT TGGTTGCCAG
GGGCGTACCG TGGTGTGCGG CATGGGTAAA TCTGGCCTGA TCGGCCAGAA GATGGTCGCC
ACCTTCGCAT CCACTGGCAC CCCGAGCTTT TTCCTGCACC CGGCCGAAGC CTTCCACGGC
GACCTGGGCA TGCTCAAGCC AATCGATGTG CTGATCCTGA TCAGCTACAG CGGCGAAACC
GAAGAGCTGA TCAAGCTGAT TCCTAGCCTG AAGTCTTTCG GTAACAAGAT CATCGCCATG
ACTGGGAACG GCAAATCTAC ACTGGCAAAG CATGCAGACA TCTGGCTCGA CATTTCGGTC
GAGCGTGAAG TCTGCCCGAA CAATCTGGCC CCCACCACTT CGACGCTGGC GACTATGGCC
ATGGGTGATG CACTGGCAGT GGCGCTGATT GAGGCTATCC AGTTCAAGCC AATGGACTTC
GCTCGCTACC ACCCCGGTGG CAGCCTGGGT CGCAAGCTGC TGACCCGTGT TTGTGACGTC
ATGCACTCGC CGGCACCTGT TGTTTCACCG TCTACCAGCT TCCATGATTG CTTGCTGGTC
ATGACCCGTA GCCGCTTGGG CATGACGGTG GTGATGGATA ACGACAAGCT GGTCGGTATC
GTTACGGACG GCGACCTGCG TCGGGCACTG CTGGAGGACG AGAGCGTTAT TCAAGCCTCG
GTCGAGCAGT TCATGACCGC TAGCCCACAC ACTATTCGCG AAGATTCTCA GCTTTCTGAG
GCTGAGGCCT ACATGCTGGA CAACAAGATT CGGGCGTTGG CTGTAACAGA CGGTGATGGT
TTGGTGGTTG GGGTGGTTGA GATTTTTGAC TGA
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| Protein sequence | MNHLSIAKEA LIAQAQAVTQ LADRLDGEFQ SAVELILGCQ GRTVVCGMGK SGLIGQKMVA
TFASTGTPSF FLHPAEAFHG DLGMLKPIDV LILISYSGET EELIKLIPSL KSFGNKIIAM
TGNGKSTLAK HADIWLDISV EREVCPNNLA PTTSTLATMA MGDALAVALI EAIQFKPMDF
ARYHPGGSLG RKLLTRVCDV MHSPAPVVSP STSFHDCLLV MTRSRLGMTV VMDNDKLVGI
VTDGDLRRAL LEDESVIQAS VEQFMTASPH TIREDSQLSE AEAYMLDNKI RALAVTDGDG
LVVGVVEIFD
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