| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_3902 |
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| Symbol | |
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| ID | 5192668 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 4383205 |
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| End bp | 4383891 |
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| Gene Length | 687 bp |
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| Protein Length | 228 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 640588375 |
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| Product | ABC-2 type transporter |
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| Protein accession | YP_001269210 |
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| Protein GI | 148549108 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1682] ABC-type polysaccharide/polyol phosphate export systems, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.111354 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTCTCG AGCCACTAGC TCACTTACTA CTGTTCTCGC TGCTCTTCGC CATGCTACGC
GGGCATACCG TTTCCGGCGT AGAATACCCA GTGTTCATTC TGGTCGGGAT GGCGCCCTTC
CTCCTATACC GAAATACGGC ACTTCGACTG ATGGATAGCC TGCGCGAGAA CCGCTCGCTT
TTTGGCTATA AGCAGATCAA ACCACTAGAC ACCTACGTCG CGCGGGTTAT CGTTGAAACC
TGCATCGCGA TCACTGTATA CGCGATCTTG GCGTTCGGTT TCGCCTGGTT CGGATTCAAC
ATGACGATCC ATAGCCCACT GCAATGGGTC ACAACCCTGC TATTGGGTCT ATTGTTTGCC
TTCGGCATGG GAATGCTACT AGCCCTTATC ACTCATGCCC TGCCTAGCTT GAAGATGGTC
ATACGCATGG CCTTTATCCC CCTCTACTTC ATCTCTGGGG TGCTGGCACC AGCCTCTTAC
CTACCTCAAG CAATGATGCC TGTGCTTCTG CTTAATCCGT TCCTACATAT CGTCGAGCTA
ATTCGTGCCG AGGTGCTTCC GCACTATACG CCAGTCGACG GCGTATCGGA GACCTACGTC
ATTAGCTTCA CCGTTATTCT GCTCTTCCTA TCACTGGGCA CCTACCGCGC TCGAAGGATG
CACCTGATTT CCACCAAGAA CGGTTAA
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| Protein sequence | MLLEPLAHLL LFSLLFAMLR GHTVSGVEYP VFILVGMAPF LLYRNTALRL MDSLRENRSL
FGYKQIKPLD TYVARVIVET CIAITVYAIL AFGFAWFGFN MTIHSPLQWV TTLLLGLLFA
FGMGMLLALI THALPSLKMV IRMAFIPLYF ISGVLAPASY LPQAMMPVLL LNPFLHIVEL
IRAEVLPHYT PVDGVSETYV ISFTVILLFL SLGTYRARRM HLISTKNG
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