| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_3901 |
|---|
| Symbol | |
|---|
| ID | 5192667 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida F1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009512 |
|---|
| Strand | - |
|---|
| Start bp | 4381647 |
|---|
| End bp | 4382237 |
|---|
| Gene Length | 591 bp |
|---|
| Protein Length | 196 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 640588374 |
|---|
| Product | hexapaptide repeat-containing transferase |
|---|
| Protein accession | YP_001269209 |
|---|
| Protein GI | 148549107 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0110] Acetyltransferase (isoleucine patch superfamily) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.0602656 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGAGGAG GAACCATTCA CTCGCTCACC AAGATCGGAC GATTTTGCTC TGTGGCTCCT
GGCGTTGAAA TAGGACCGGG AAATCACCCA ACCACTTTTC TCAGTACTCA CCCTTTTCAG
TATGGGGCAA GCGGATTCGA TTTCTGGCCT GCCTTCAAAG GCTTCGATCA TGGAAGCTTA
AGCGTTCCTG CTGAAGTCGC TAAGGCTGCC CCAATCATAG GCAATGACGT TTGGATTGGT
GCACAAGTTT TCATACCTAG GGGCGTGGTA ATTGGCGACG GTGCCGTCAT TGCTGCAGGA
TCGGTGGTAA CCAAGGATGT GAAACCTTAT GAGATCGTGG GTGGAGCTCC TGCCAAGCAT
ATTCGTTTTC GCTTCGAGGC TGAGATTATT GATGCTCTCC TTGAGCTGAA GTGGTGGGAC
TATGAGCCTG CTACTTTGGC TGGCGTGCCC TTTGACGACA TTAGGTCTGC TATCGAAGAG
ATAAGCAGAC GCAAAGCTGC TGGATTGTTA AAACGCTTGG ATAGCCCGCG TTTTTACATT
CAAGATGGTG AGGTCGAACT CATCGGCAAG CAACCTATTC CTGTGCCTTA G
|
|---|
| Protein sequence | MRGGTIHSLT KIGRFCSVAP GVEIGPGNHP TTFLSTHPFQ YGASGFDFWP AFKGFDHGSL
SVPAEVAKAA PIIGNDVWIG AQVFIPRGVV IGDGAVIAAG SVVTKDVKPY EIVGGAPAKH
IRFRFEAEII DALLELKWWD YEPATLAGVP FDDIRSAIEE ISRRKAAGLL KRLDSPRFYI
QDGEVELIGK QPIPVP
|
|---|
| |