Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_3895 |
Symbol | |
ID | 5192996 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | + |
Start bp | 4376391 |
End bp | 4377392 |
Gene Length | 1002 bp |
Protein Length | 333 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640588368 |
Product | alcohol dehydrogenase |
Protein accession | YP_001269203 |
Protein GI | 148549101 |
COG category | [R] General function prediction only |
COG ID | [COG2130] Putative NADP-dependent oxidoreductases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.0873221 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCAGA CCAACCGCCG CTTCCTGCTT GCCAAACGCC CGGTCGGCGC CGTGCGCCGT GACGACTTCA GCTTCGAGAC CGTACCCGCC GAACAACCCG GCGAAGGCCA GGTACTGGTG CGCAACCTGT ACCTGTCGCT GGACCCGGCC ATGCGCGGCT GGATGAACGA AGGCAAGTCC TACATCCCGC CCGTGGCCCT GGGCCAGGTA ATGCGTGCGC TGGGTGTAGG TGAAGTGGTT GCCTCCAATC ACCCCGGCTA CCAGCCCGGC GACCACGTGA GCGGCGCCCT CGGTGTGCAG GACTACTTCA CCGGCGAGCC CCAGGGCCTG CACAAGATCG ACCCCAAGCT GGCCCCCCTG CCCCGTTACC TGTCAGCCTT GGGCATGACC GGCATGACCG CCTACTTTGC CCTGCTGGAG GTCGGCCAAC CCAAAGCTGG CGACACCGTG GTCATTTCCG GCGCGGCCGG TGCGGTGGGC AGCATTGTCG GGCAGATTGC CAAGATCAAA GGCTGCCGCG TGGTCGGCAT TGCCGGCGGT GCCGAGAAGT GCCAGTACCT GAAGGACGAA CTGGGCTTTG ACGGCGTGAT CGACTACAAG GCCGAAGACG TGCTGGCCGG CCTGAAGCGC GAATGCCCCA AAGGCGTGGA CGTGTACTTC GACAACGTGG GCGGCGACAT CCTCGATGCC GTGCTGACGC GCATCAACTT CAAGGCACGC ATCGTGATTT GCGGCGCGAT CAGCCAGTAC AACAACAAAG AAGCGGTAAA AGGCCCGGCC AACTACCTGT CGCTGCTGGT CAACCGCGCG CGCATGGAAG GCTTTGTGGT GATGGATTAC AGCAAAGACT ACGGCAAAGC CGCGCTGGAG ATTGCCGGCT GGCTGGCCAG CGGGCAGGTG AAGAGCAAAG AGGACGTGGT GGAAGGGCTG GAAACCTTCC CGGAGACCTT GTTGAAGCTG TTCAGCGGGG AGAATTTTGG CAAGTTGGTG TTGAAGGTTT AA
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Protein sequence | MTQTNRRFLL AKRPVGAVRR DDFSFETVPA EQPGEGQVLV RNLYLSLDPA MRGWMNEGKS YIPPVALGQV MRALGVGEVV ASNHPGYQPG DHVSGALGVQ DYFTGEPQGL HKIDPKLAPL PRYLSALGMT GMTAYFALLE VGQPKAGDTV VISGAAGAVG SIVGQIAKIK GCRVVGIAGG AEKCQYLKDE LGFDGVIDYK AEDVLAGLKR ECPKGVDVYF DNVGGDILDA VLTRINFKAR IVICGAISQY NNKEAVKGPA NYLSLLVNRA RMEGFVVMDY SKDYGKAALE IAGWLASGQV KSKEDVVEGL ETFPETLLKL FSGENFGKLV LKV
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