| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_3892 |
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| Symbol | |
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| ID | 5194046 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 4372219 |
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| End bp | 4374159 |
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| Gene Length | 1941 bp |
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| Protein Length | 646 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640588365 |
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| Product | methyl-accepting chemotaxis sensory transducer |
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| Protein accession | YP_001269200 |
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| Protein GI | 148549098 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.176231 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCGCGA GCAAGCACGG TGTGCTGGCC AACCTGGGCA TGGCCCGCAA ACTTGGCCTG
GGCTTTGCCT TGGTGCTGCT GCTGACACTG GCGGTGGCGG CTATCGGCGT CGCGGCGTTG
CACAGCGTTG GCCAGCGCTT CGACAGCTTG CGTCAGCTGG CCCAGTTCAA TACCGACTTG
CTGCGCTTGC GCGAGCATGA GCAGGCGTTT GCCCTGCGCT CCGACATGCA GCAGGCCGAC
GCCTTGCGTG GCGGCCTGCA GGGCTTGGTG GAACGCGCCC GAGGCCTGCC GGCGCTGGCG
GCGGCGCAAA CCGATCTTGC GGCCTATGGC CAGGCCTTCG AAGCCTTTGT CGAGGCCGTG
CAAGCCAAGG AGCTGGCGCT GGACATGGCC AGCTGGTCGG TGTCCAACGT GTCCAACAAC
CTTGATGTGC TGCAGGCCGG CCTGGCCGAT GACGGCGTGT ACACCCTCAA GCAGTCCCAG
GGCCAGCAGG GGGGCGAGTT TCTGGAGCAA GCCGCGCAGG TGGCCCAGGT GTCGCGGCTG
ATGCTGCAGG CCATGGACGA AGCACGGGTA CGCCTGGAAA AAAGCCGCAA GGGCGAGGAG
GGTGTGAGCC AGGAGCGTAT TGCCCAGACG GTGGAGGCCG CTGGCCTGGT CAGTCAGTTG
CAAGGCGCGG TTGGCGATGC CGGTTATCAG AGTGTGTTGG GCGAAGTGGC TGGGCACATT
GGCAGTTTCT CGGAAAAGCT CAACGAATAC ACCGACCAGC TGGCCCGCGA GCAGGGGCTC
AAGGCGCAGT TGCAAGCCAG CGCCGAGCGG GTTACCGGGC GTGTCGACCA GGCCTATCTT
GGGCAGGAGC AGGCCCTACA GGGCGAGCTG CAGCGTAATG CCTTGGCCAT CGGCCTGGCC
ACGGCGCTGG CGCTGCTTGT AGGCGTGTTG GCGGCCTGGC TGATTACCCG GGCTGTGGTC
GGCCCGTTGA AGCATGTGAT TGCCCGTGCC CAGCGCATTG CGGCGGGGGA GCTGGGTTTC
GACGCCCAGG CGCCGCGCCG GGATGAGGTG GGGCAACTGA TGCAGGCCAT GCAGCAGATG
GCGGCGGGGC TCTCGGGCAT TGTCAGCGGC TTGCAGCAGG GCATCGAACA ATTGGCCGGC
AGTGCCCAGG CGTTGTCGAC GGTGACTGAG CAGACCAACC GCGAGGTGGG CAGCCAGAAG
GAAGAAACCG AACAGGTGGC GACCGCCATG CAGCAGATGA CTGCCACCGT GCACGATGTG
GCGCGCAATG CCGAGGAGGC GGCGCAGGCG GCCCAGGCGG CGGACGAAAA GGTCGACACC
GGCCAGCAGG TGGTGCGCCA GAGCATGCAG CGCATCGAGC AGCTGGCGTC GGCGGCAGAA
GCTGCCAGCG CCGGCATCGA CAGCCTCAGT GCCGAAATCC ACACCATTGG TGACGTGCTG
GAAGTGATCA AGAGCGTGGC CGAGCAAACC AACCTGCTGG CGTTGAATGC CGCCATCGAG
GCTGCCCGCG CCGGCGAGCA GGGGCGCGGC TTTGCCGTGG TGGCCGATGA AGTGCGCGCC
CTGGCGCGGC GTACCCGGCA ATCCACCGAG CAGATCGAGA CCTTGGTGGC CAGCCTGCGC
GGCAATGCCC AGCAGTCAGT GACGCAGATC CGCGGCAGTA CCGAGCTGGT GCGGCTGGCC
GTGGCCGATG CACTGCAGAC CGAAAGTGCG CTGGGCAGCA TTGCCGCAGC GGTGTCATTG
ATTCAGCAGA TGAACCAGCA GATTGCCGCA GCCGCCGAGC AGCAGAGTTC GGTGGCGGAA
GAGATCAGCC GCAGTGTCAC GCAGATTCGT GGCAGTGCGG ACCAGGCGGC GTTGGCGATG
CAGGACAATG CCCGGTCCAG TGTCGAGCTG GCGCAGCTGG GCACCGATTT GAAGGGCATG
GTGGGGCATT TCAGGTTGTA A
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| Protein sequence | MGASKHGVLA NLGMARKLGL GFALVLLLTL AVAAIGVAAL HSVGQRFDSL RQLAQFNTDL
LRLREHEQAF ALRSDMQQAD ALRGGLQGLV ERARGLPALA AAQTDLAAYG QAFEAFVEAV
QAKELALDMA SWSVSNVSNN LDVLQAGLAD DGVYTLKQSQ GQQGGEFLEQ AAQVAQVSRL
MLQAMDEARV RLEKSRKGEE GVSQERIAQT VEAAGLVSQL QGAVGDAGYQ SVLGEVAGHI
GSFSEKLNEY TDQLAREQGL KAQLQASAER VTGRVDQAYL GQEQALQGEL QRNALAIGLA
TALALLVGVL AAWLITRAVV GPLKHVIARA QRIAAGELGF DAQAPRRDEV GQLMQAMQQM
AAGLSGIVSG LQQGIEQLAG SAQALSTVTE QTNREVGSQK EETEQVATAM QQMTATVHDV
ARNAEEAAQA AQAADEKVDT GQQVVRQSMQ RIEQLASAAE AASAGIDSLS AEIHTIGDVL
EVIKSVAEQT NLLALNAAIE AARAGEQGRG FAVVADEVRA LARRTRQSTE QIETLVASLR
GNAQQSVTQI RGSTELVRLA VADALQTESA LGSIAAAVSL IQQMNQQIAA AAEQQSSVAE
EISRSVTQIR GSADQAALAM QDNARSSVEL AQLGTDLKGM VGHFRL
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