Gene Pput_3889 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_3889 
Symbol 
ID5192895 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp4369675 
End bp4370046 
Gene Length372 bp 
Protein Length123 aa 
Translation table11 
GC content64% 
IMG OID640588362 
Productglutaredoxin 
Protein accessionYP_001269197 
Protein GI148549095 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0695] Glutaredoxin and related proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.280842 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGTCA AAGCCCTGCG GGTTGGCCTC GGCCAGCTCA TTGTGTTCGG TGACTGGATC 
AGCCGCCCGG CCAAACGCAA GCGCGACGCG GCCGCCCAGG CCCGCATCGA GCAAGCGGCC
AAGGGGCTGG CGCTGTACCA GTTCCACGCC TGCCCGTTCT GCGTCAAAAC CCGCCGCACC
CTGCACCGTT TGAACGTGCC GGTGGCGCTG CGCGACGCCA AGAACGACCC GGTGCACCGC
CAGGCCCTGC AAGAAGGTGG CGGCCGAGTG AAAGTGCCAT GCCTGCGCAT TGAAGAAGCC
GGCAAGGTGA CTTGGATGTA TGAGTCCAAG GCGATCATCG CTTACCTGGA TGAGCGGTTT
GCCACCATCT GA
 
Protein sequence
MIVKALRVGL GQLIVFGDWI SRPAKRKRDA AAQARIEQAA KGLALYQFHA CPFCVKTRRT 
LHRLNVPVAL RDAKNDPVHR QALQEGGGRV KVPCLRIEEA GKVTWMYESK AIIAYLDERF
ATI