Gene Pput_3882 details

Gene Information

• Locus tag: Pput_3882
• ID: 5193613
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas putida F1
• Kingdom: Bacteria
• Replicon accession: NC_009512
• Strand: +
• Start bp: 4363567
• End bp: 4364349
• Gene Length: 783 bp
• Protein Length: 260 aa
• Translation table: 11
• GC content: 64%
• IMG OID: 640588355
• Product: hypothetical protein
• Protein accession: YP_001269190
• Protein GI: 148549088

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 0.0219441
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 17
• Fosmid unclonability p-value: 0.242348
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGACCACCT CCCCCACCGC CGTCGAGCCG GCCGAAGAAC CCCAGGAAAT TCCCGCCCTG 
CCCTGGGCCG AGCTGACCGC CGAACATTTC CAGCTGCTGC GCCTGGCAGC ACTGCCTACC 
GACCGCAGCA CCGGCGCGCG GCCGCTGCGT TTTGTGCAGT TCGGCTATGC CGAGCGCCAT 
GACAAGGCAC ACAGCCTGCT GCGCATGGAA ATCCAGCTGC CTGGGCAGAA AGTACACAAA 
GAGCAGAACC GCCTGGACAT CCGCGTCGAC CATGCCGAGC GCCTGGTGCG TATTGGCAAT 
GAACATGGCC TGCAACTGGA ACCGGTGAAC CGTGGCATCG GCCGTTTCAT GCTGGCCCAG 
GCCGCGCAGT GGTTGCAGCG CAGGTGGTCG CACTACCGGG TTGAAGGCAT GGCGCTGCCG 
AGCAAGGATG CCCTGAACGA GGACTCACGC CTGCGCCGTG ACCACTGCTT GCGCGGGGTG 
GGTATCGAGG TGCAGTACGA GGACAGCCAG CACCTGAAGG GCCGTACCGC GGATATGACG 
GTGGGCCAGC TCAAGGCCGC CTGGAGCAGC GAGCGCCTGC AGCGGGTGGA GATTCTGGAT 
GCCGCCAACC TGCTGCAGCA GGCGGACCAG CAACTGCAGG AAAAGGAAGG GCAACTGCGC 
GAGCGGGATG AGCGCGTGGC CAAATACCAG CGCGAAGACG GCGGATTGCG TTTCACCATT 
ACCTGCCTGG TGGCGTTTGC CGTGTTCCAG GCAGGGCTGT TGATCTGGAT TGCAACCCGC 
TAA 

 

Protein sequence

MTTSPTAVEP AEEPQEIPAL PWAELTAEHF QLLRLAALPT DRSTGARPLR FVQFGYAERH 
DKAHSLLRME IQLPGQKVHK EQNRLDIRVD HAERLVRIGN EHGLQLEPVN RGIGRFMLAQ 
AAQWLQRRWS HYRVEGMALP SKDALNEDSR LRRDHCLRGV GIEVQYEDSQ HLKGRTADMT 
VGQLKAAWSS ERLQRVEILD AANLLQQADQ QLQEKEGQLR ERDERVAKYQ REDGGLRFTI 
TCLVAFAVFQ AGLLIWIATR