| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_3881 |
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| Symbol | |
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| ID | 5193612 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 4362539 |
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| End bp | 4363501 |
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| Gene Length | 963 bp |
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| Protein Length | 320 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640588354 |
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| Product | alpha/beta hydrolase fold |
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| Protein accession | YP_001269189 |
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| Protein GI | 148549087 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG2267] Lysophospholipase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.00418628 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.248118 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGTCGC GCCTCGTCGC CTTGCTCTTC CTGCTGTGCA CCGGCCTGGC CCAGGCCGCC
GCCCCCACTG TACTGCAACG CCCGATCGAC CTGGACACCG GCCAGGGCGT GCTGCACGGC
AGCCTGCTGC TGCCACAACA GGCCACCCCG CCGCCAGTGG TGCTGATCAT CGCCGGCTCC
GGCCCCACCG ACCGCGACGG CAACAACCCG GCGTCGGGCC GGGTCGACAA CCTGAAGCGC
CTGGCCCTGC TGCTGGCCAA CGAACACATT GCCAGCGTGC GTTACGACAA ACGCGGGGTG
GCCGCCAGCC AGCCGGCCAC GCCTGACGAG CGTGACCTCA GCGTGGAGCG CTACGTGGCC
GATGTGGTCG CCTGGAGCCG CAAGCTCAAA GCCGACCCGC GCTTCGGCCC GCTGATCCTG
ATTGGCCACA GCGAAGGCGC ACTGATTGCC AGCCTGGCCG CCGAGCAGGC TGGCGCCAGC
GCAGTCATCA CCCTGGCCGG CAGCGGCCGG CCGCTGGCCG AGGTGCTGCA CGAACAACTG
GCCCAGCGCC TGCCGCCCGC GCAACTGGCC GGTGGCAGTG CCCTGCTCGA CCGCCTGCAG
GCCGGGCAGA CCAGCCTGGA TGTGCCAGCG CCGCTGCGCC AGGTGTTTCG CCCCAGCGTG
CAGCCGTACC TGATTTCGCT GTTCCAGCAA AACCCGGCAG CCGCCTTTGC CCGCCTGCCC
ATGCCCGCGC TGATCGTGCA GGGGCGCAAC GACGTGCAGG TGGACGTGGC CGACGCCCAA
CGGCTGAAAG CGGCCAAGCC AGATGCACAA CTGGTCCTGA TTGATGGCAT GAACCACATG
CTGCGCATCA GCCCCAAGGG CATGAGCCAG CAGCGCGACA GCTACCTCAA CCCCGAGCTG
CCGCTGGCGC GTGAGCTGGG CGAGCGAATT GTGACGTTCA TCCAGCATTT GCCTTCGGCG
TAA
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| Protein sequence | MMSRLVALLF LLCTGLAQAA APTVLQRPID LDTGQGVLHG SLLLPQQATP PPVVLIIAGS
GPTDRDGNNP ASGRVDNLKR LALLLANEHI ASVRYDKRGV AASQPATPDE RDLSVERYVA
DVVAWSRKLK ADPRFGPLIL IGHSEGALIA SLAAEQAGAS AVITLAGSGR PLAEVLHEQL
AQRLPPAQLA GGSALLDRLQ AGQTSLDVPA PLRQVFRPSV QPYLISLFQQ NPAAAFARLP
MPALIVQGRN DVQVDVADAQ RLKAAKPDAQ LVLIDGMNHM LRISPKGMSQ QRDSYLNPEL
PLARELGERI VTFIQHLPSA
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