| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_3880 |
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| Symbol | |
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| ID | 5190492 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 4361208 |
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| End bp | 4362299 |
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| Gene Length | 1092 bp |
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| Protein Length | 363 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640588353 |
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| Product | chorismate synthase |
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| Protein accession | YP_001269188 |
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| Protein GI | 148549086 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0082] Chorismate synthase |
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| TIGRFAM ID | [TIGR00033] chorismate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.00247284 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.2451 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGGCA ATACCTACGG CAAGCTGTTC ACTGTCACCA CCGCTGGCGA GAGCCATGGC
CCGGCGTTGG TCGCCATTGT CGATGGATGC CCTCCGGGCC TGGAAATTTC CCTCGCCGAC
CTGCAGCACG ACCTTGACCG GCGCAAGCCC GGCACCAGCC GGCACACCAC CCAGCGCCAG
GAAGCCGACG AGGTAGAAAT CCTTTCCGGC GTGTTCGAAG GCCGCACCAC CGGCTGCTCG
ATCGGCCTGC TGATCCGCAA CACCGACCAG AAGTCCAAGG ACTACTCGGC CATCAAGGAC
CTGTTCCGCC CGGCCCACGC CGACTACACC TACCACCATA AGTACGGTAT CCGCGACTAC
CGCGGCGGCG GCCGCAGCTC GGCCCGCGAA ACCGCCATGC GCGTGGCCGC CGGCGCTATC
GCCAAGAAGT TCCTGGCCAC CCAGGGCATC ACCGTGCGTG GCTACATGAG CCAGCTGGGC
CCGATCGAAA TCCCGTTCAA GACCTGGGAG TCGGTGGAGC AGAACGCCTT CTTCAGCCCT
GATCCGGACA AAGTACCTGA GCTGGAGGCC TACATGGACC AGCTGCGCCG AGACCAGGAT
TCGGTGGGCG CCAAGATCAC CGTGGTTGCA GAAGGCGTGA TGCCCGGGCT GGGCGAACCG
ATCTTCGACC GCCTGGATGC AGAGCTGGCC CATGCGCTGA TGAGCATCAA CGCGGTCAAG
GGCGTGGAAA TCGGCGCCGG CTTCGCCAGT GTGGCCCAGC GCGGCACCGA GCACCGGGAC
GAACTGACCC CGGAAGGCTT CCTCAGCAAC AATGCAGGCG GCATTCTGGG CGGTATTTCC
TCGGGCCAGC CGATCGTTGC CCACCTGGCA CTGAAGCCCA CTTCCAGCAT CACCACCCCG
GGCCGCTCGA TCGATGTCGA TGGCAACCCG GTGGACGTCA TCACCAAGGG CCGCCATGAC
CCGTGCGTGG GCATCCGTGC CACGCCGATT GCCGAGGCGA TGATGGCCAT TGCGCTGATG
GACCACCTGC TGCGACACCG TGCGCAGAAT GCCGATGTGC AAGTGAATAC CCCGGTGCTG
GGCCAGCGCT GA
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| Protein sequence | MSGNTYGKLF TVTTAGESHG PALVAIVDGC PPGLEISLAD LQHDLDRRKP GTSRHTTQRQ
EADEVEILSG VFEGRTTGCS IGLLIRNTDQ KSKDYSAIKD LFRPAHADYT YHHKYGIRDY
RGGGRSSARE TAMRVAAGAI AKKFLATQGI TVRGYMSQLG PIEIPFKTWE SVEQNAFFSP
DPDKVPELEA YMDQLRRDQD SVGAKITVVA EGVMPGLGEP IFDRLDAELA HALMSINAVK
GVEIGAGFAS VAQRGTEHRD ELTPEGFLSN NAGGILGGIS SGQPIVAHLA LKPTSSITTP
GRSIDVDGNP VDVITKGRHD PCVGIRATPI AEAMMAIALM DHLLRHRAQN ADVQVNTPVL
GQR
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