| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_3864 |
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| Symbol | |
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| ID | 5191994 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 4345070 |
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| End bp | 4347202 |
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| Gene Length | 2133 bp |
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| Protein Length | 710 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640588336 |
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| Product | TonB-dependent siderophore receptor |
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| Protein accession | YP_001269172 |
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| Protein GI | 148549070 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4773] Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0182976 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0196444 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCCCGC ATCACCCCCG CCTGCCCCTG AGCCTGCTCA GCCTGGGCCT GGCCCTGCAG
TGCCCCTCTG TGCTTGCCGA AGACAGCGTG GTGCTGGCCC CGTTGCAGGT CTCCGACACC
TACGCCAATG ATGGCTATCA GGTACGCCAG GCCGCGGTGG CCGGCTTCCA GCCCGCGCCA
CTGCTCGACA CCCCCGCCTC CATCAGCGTG TTCAGCCAGC AGTTGCTGGA AGACCGCCAG
GTACGCAAGC TTAGCGAAGT GTTGCAAAGC GATGCCTCGG TCGGCGAAAG CTATGCCCCC
ATCGGCTACT ACGAAAACTT CAATGTGCGC GGCTTCGAGC TGAACGCCGC CAGTAGCTAT
CGCATCAATG GCCAGACCAT TGCCGGCGAA CAGAACGTAG CCCTGGAAAA CAAGCAGCAG
GTGGAATTGC TCAAGGGCCT GTCCGGGCTG CAGACCGGCG TGTCGGAGCC GGGCGGCTTG
ATCAACTATG TGACCAAGCG GGCCCAAGAC ATACGCAGCG TCACGGTATC GACCAACGAA
CAAGGCGAAC GCTATCTGGC CACCGACCTT GGCGGCTGGT TCGGCAGCGA AAAGCAGTTC
GGCCTGCGCG CCAACCTAGC CCATGAAGAC ATCCGCACCT ACGTCGACCA CGCTGACGGC
AAGCGCGACT TCGCCTCGCT GGCATTCGAC TGGCAGATCA ACCCGGATGC CACCCTGCAG
CTGGATGCCG AGTATCAACA CCGCGAACAG TCGTCGGTGC CGGGTTACCA GCTGCTCGGA
GGCACTGAAG TGCCACACGG CGTCGACCCG GAAGACCGCC TGGCCTACCA GCATTGGGCA
AAGCCCGTGC AGAACGACTC ACTGAACCTG GGCGGGCGCT TCGAATACCG CCTCAACGAT
ACCTGGACCG GCACCGTGAG CGCCTCCCGC AGCAAAGTGG TGATCGACGA CTACAGCGCG
TTTGCCTGGG GTTCGAGCGA GGGGGCGTTT TTCGGCAGCA ATGGTGACTA CGACATCTAT
GACTTCCGCA GCCCCGACGA TACCCGCCGA ACCGACGAGG CGCAGGCCAT GCTCAACGGG
CACTTCGATG CGCTGGGGGT GGGGCACGAG CTGACCGTGG GTACCAGTGC GCAGCGACGC
ACACTGGATC AGCGCCCGTA CTACAACGAG TGGCTTGGTA CTGGCAACAT CCATACCGGC
GCCCCGGACC TCGATCCGTC CGACAAACCC GTCGGCGCCA GCGAACGCCG CCTGGACAGC
CGCCAGTACG GCTTGTTCGT CAGCGACCGC ATCAGCTTCA ACGAACAATG GCAGACCGTG
CTGGGCGCCC GTGAAGTGCG CCTGGATGAA AAGACTTGGG ACGAGAACGG CGTAGCCGGG
CGCCATACCC GCCAATACGA GCTGCTGCCC AACGCTGCGC TTATCTACAA ACCGCAGCCG
AACACCACGG TATACGCCAG CTACGCCAAG GGCCTGTCTG CCGGAGGCAC AGCACCCTGG
TTCGCCAGCA ATGCAGCTGA AATCCTTGCA CCCACCACCT CCCGCCAACT GGAACTTGGC
CTCAAGCACG ACTGGCAAGG CCTGAGCCTG AGTGCCGCCC TGTTCCAGAT CCGCCAGGCG
TACCAGTACG CGCGCCCAGA CGGCACCGGC AACTTCACCT ACGTGCAGCA AGGCCAGCAG
AAAAATACCG GCCTGGAACT GGGCGCCAGC GGTCGGGTGA CCCCAAACCT GCAGGTACAG
GCCAGTGCGG CAGCCATTCG GGCGCGGGTG CAGAACAGCG GCACCGAAGC CTATGAAGGC
CACCAGGCGA TCAACGTGCC TAAATTCCGG GCGGCGCTGC ATGCGGAATA TGCCCTACCG
GTTCCGGGGC TGGCGCTGCT GGGCGGGGCG CGGTATAGCG CCAGCAAGTA TGCGAGCCAG
GCGGGCAATG TGGAGGTTGG CGGGTATACC GTGTTCGACC TTGGCAGCCG CTACAGTACC
CGTGTTGGCG GGTATGACAC GGTGCTGCGG CTGACGGTGG ATAACGTGCT GGACAAGCGA
TACTGGCGCG ATGTGGGCGA TTACCTGGGG GATAACTACC TGTTCCAGGG AGCACCGCGT
ACCGCTCGGC TTTCGGCTTC GATCAGCTTC TAG
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| Protein sequence | MPPHHPRLPL SLLSLGLALQ CPSVLAEDSV VLAPLQVSDT YANDGYQVRQ AAVAGFQPAP
LLDTPASISV FSQQLLEDRQ VRKLSEVLQS DASVGESYAP IGYYENFNVR GFELNAASSY
RINGQTIAGE QNVALENKQQ VELLKGLSGL QTGVSEPGGL INYVTKRAQD IRSVTVSTNE
QGERYLATDL GGWFGSEKQF GLRANLAHED IRTYVDHADG KRDFASLAFD WQINPDATLQ
LDAEYQHREQ SSVPGYQLLG GTEVPHGVDP EDRLAYQHWA KPVQNDSLNL GGRFEYRLND
TWTGTVSASR SKVVIDDYSA FAWGSSEGAF FGSNGDYDIY DFRSPDDTRR TDEAQAMLNG
HFDALGVGHE LTVGTSAQRR TLDQRPYYNE WLGTGNIHTG APDLDPSDKP VGASERRLDS
RQYGLFVSDR ISFNEQWQTV LGAREVRLDE KTWDENGVAG RHTRQYELLP NAALIYKPQP
NTTVYASYAK GLSAGGTAPW FASNAAEILA PTTSRQLELG LKHDWQGLSL SAALFQIRQA
YQYARPDGTG NFTYVQQGQQ KNTGLELGAS GRVTPNLQVQ ASAAAIRARV QNSGTEAYEG
HQAINVPKFR AALHAEYALP VPGLALLGGA RYSASKYASQ AGNVEVGGYT VFDLGSRYST
RVGGYDTVLR LTVDNVLDKR YWRDVGDYLG DNYLFQGAPR TARLSASISF
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