| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_3856 |
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| Symbol | |
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| ID | 5195087 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 4337270 |
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| End bp | 4337839 |
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| Gene Length | 570 bp |
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| Protein Length | 189 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640588328 |
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| Product | elongation factor P |
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| Protein accession | YP_001269164 |
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| Protein GI | 148549062 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0231] Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) |
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| TIGRFAM ID | [TIGR00038] translation elongation factor P |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.198418 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.116801 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAAACTG GTAAAGAACT GAAACCCGGT ACCGTCCTGC GGATCGACAA CGACCCGTGG
CTGGTTCAAA AAGCTGAGTT CACCAAGTCG GGCCGTAACA GCGCGATCAT GAAGACCAAG
CTGAAGAACC TGCTGACCGG CTACAAGACC GAAACCGTAT ACGGTGCGGA CGACAAGCTG
GACGACGTGA TCCTGGATCG CAAAGAAGCG ACCCTGTCGT TCATCAATGG TGACGAGTAC
ACCTTCATGG ACACCACCGA CTACACCATG TACGAGCTGA ACGCCGAGGA CATCGAAGCC
GTTCTGCCGT ACATTGAAGA AGGCATGGAA GACGTCTGCG AAGCCGTGTT CTTCGAAGGC
CGTCTGGTGT CGGTTGAGCT GCCGACCACC ATCAGCCGTA AAGTTGTCTA CACCGAGAAC
GCTGCTCGCG GTGACACCTC CGGCAAAGTC ATGAAGCCTG CCAAGCTGGC GAACGGTACC
GAGATCTCGG TTGCTGACTT CATCCAGATC GACGAGTGGA TCGACATCGA CACTCGCGAC
AACAGCTTCA AAGGCCGCTC CAAGAAGTAA
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| Protein sequence | MKTGKELKPG TVLRIDNDPW LVQKAEFTKS GRNSAIMKTK LKNLLTGYKT ETVYGADDKL
DDVILDRKEA TLSFINGDEY TFMDTTDYTM YELNAEDIEA VLPYIEEGME DVCEAVFFEG
RLVSVELPTT ISRKVVYTEN AARGDTSGKV MKPAKLANGT EISVADFIQI DEWIDIDTRD
NSFKGRSKK
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