Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_3854 |
Symbol | |
ID | 5195250 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | + |
Start bp | 4336012 |
End bp | 4336467 |
Gene Length | 456 bp |
Protein Length | 151 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640588326 |
Product | MarR family transcriptional regulator |
Protein accession | YP_001269162 |
Protein GI | 148549060 |
COG category | [K] Transcription |
COG ID | [COG1846] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.113287 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.119098 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGCCG ACACCCAAGC CTCCTGTGAC GAGCTGCTGC TGGACAACCA GGTCTGTTTC GCCCTGCACT CCACCTCGTT GCTGATGACC AAGGTCTACA AGCCGTTGCT GCAGGCGCTG GGCCTGACCT ACCCGCAATA CCTTGCCATG CTCGTGCTCT GGGAGCGTGA CGGCCTGACC GTGGGCGAAA TCAGCCAGCA CCTGCTGACC GACCCAGGCT CGCTGACCCC GCTGCTCAAG CGCCTGGAAA GCGAAGGCCT GTTGCAGCGC AACCGCAGCC GCGAAGATGA ACGGGTAGTG ATGGTACAGC TGACCGACAA AGGCCGCGCC CTGCAACAGC AGGCCAAAGA GGTGCCGCCG TGCATTCTCA AGGCCAGCGG GCGGAGCCTT GAGCAGTTGC AGAAACTGCA AGCCGACCTG CTGAACCTGC GCGAAAACCT GCAGAAAAAC CTCTGA
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Protein sequence | MNADTQASCD ELLLDNQVCF ALHSTSLLMT KVYKPLLQAL GLTYPQYLAM LVLWERDGLT VGEISQHLLT DPGSLTPLLK RLESEGLLQR NRSREDERVV MVQLTDKGRA LQQQAKEVPP CILKASGRSL EQLQKLQADL LNLRENLQKN L
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