| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_3851 |
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| Symbol | |
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| ID | 5194520 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 4333257 |
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| End bp | 4334108 |
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| Gene Length | 852 bp |
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| Protein Length | 283 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640588323 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001269159 |
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| Protein GI | 148549057 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.522354 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.130982 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCCAGT ACCAGAGCCT CGACGCGGAC GTTCTGCGCA CCTTCGTCGC CATTGCCGAG
CAAGGCGGCT TTACCCGCGC AGGCGAAGTG GTCAACCGCA CCCAGTCAGC GGTCAGCATG
CAGATGAAAC GCCTGGAAGA AGACATTCTG CAGCGCCAGC TATTCGAACG TGATGGCCGT
CAGGTGCGGC TGACCGCCGA AGGCCAGGTA CTGCTGGGGT ATGCCCGACG CATTCTCAAG
TTGCATGGCG AGGTGTTCAA CACCCTGCGC ATGCCGCACA TGGTTGGGCT GGTGCGCATC
GGCACACCAG ACGACTACGC CATGCGCTTC CTGCCGACCA TCTTGTCGAG CTTTGCCCAA
GCCTACCCGC TGGTGCAGGT GGAAGTGCAT TGCGATTCGT CCAAGCAGTT GATGCTGCGC
CAGGACCTGG ACCTGACCAT CGTCACCCGC GAGCCCGGCA ACGAGATTGG CCAGTTGCTA
CGCCAGGAAC GCCTGGTCTG GGCCGCGGCA GAAGGCTTTT GCCCGCACGA ACAGCGGCCG
ATGCCGGTGG CGCTGTTCAA CACCGACTGC TTCTGTCGCG CCTGGACCTG CAATGCGCTG
GAGGCACAGG GCATCGATTA CCGTATTGCC TACACCAGCC CAAGCCTGGC GGCAATCTTT
GCCATCGTCA CCGCCGGGCT GGCAGTGACC GCGCAGCTGC AGAGCCTGAT CGGGGGCAAC
ATCCGCATTC TGGGTGAGAG CGAAGGGCTG CCACAGTTGC CCATGGCCAA TGTAATGCTG
GTGCGCAGTA CGCAGACCCC CTCGCCAATC ACCGACTGCA TGGCCGACTA CATCGTTGAG
GGTTTCAAGT GA
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| Protein sequence | MSQYQSLDAD VLRTFVAIAE QGGFTRAGEV VNRTQSAVSM QMKRLEEDIL QRQLFERDGR
QVRLTAEGQV LLGYARRILK LHGEVFNTLR MPHMVGLVRI GTPDDYAMRF LPTILSSFAQ
AYPLVQVEVH CDSSKQLMLR QDLDLTIVTR EPGNEIGQLL RQERLVWAAA EGFCPHEQRP
MPVALFNTDC FCRAWTCNAL EAQGIDYRIA YTSPSLAAIF AIVTAGLAVT AQLQSLIGGN
IRILGESEGL PQLPMANVML VRSTQTPSPI TDCMADYIVE GFK
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