| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_3849 |
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| Symbol | |
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| ID | 5193256 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 4330217 |
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| End bp | 4331563 |
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| Gene Length | 1347 bp |
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| Protein Length | 448 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640588321 |
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| Product | phospho-2-dehydro-3-deoxyheptonate aldolase |
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| Protein accession | YP_001269157 |
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| Protein GI | 148549055 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3200] 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase |
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| TIGRFAM ID | [TIGR01358] 3-deoxy-7-phosphoheptulonate synthase, class II |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.12715 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0868042 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCAAC CGTGGAGCCC CGACAGCTGG CGTGCCCTGC CGATCCAGCA GCAACCGACC
TACCCCGATG CCGCGCACCT GCTGAAGGTT GAACAGACCC TGGCCAGCTA CCCGCCGCTG
GTGTTCGCGG GTGAGGCGCG CGAGCTGCGC CGGCAGTTCG CCGAGGTCAC CGAAGGCCGT
GCCTTTCTGC TTCAGGGCGG TGATTGCGCC GAGAGCTTCG CCGAGTTCTC GGCTGCAAAA
ATCCGCGACA CCTTCAAGGT GTTGCTGCAA ATGGCCATTG TCATGACCTT TGCCGCCGGC
TGCCCGGTGG TGAAAGTGGG GCGTATGGCC GGGCAGTTCG CCAAACCGCG CTCATCTGGC
GATGAAACCA TTGGCGACAT CACCCTCCCC GCCTACCGTG GCGACATCGT CAACGGCATC
GGTTTCGACG CCAAAAGCCG CATTCCGGAC CCGGAACGCC TGCTGCAGGC CTACCACCAG
GCCACCGCCA GCCTCAACCT GCTGCGCGCG TTCGCCCAGG GCGGGTTTGC CGATCTGCAC
CAGGTGCACA AGTGGAACCT GGACTTTATC GCCAACTCGG CGCTGGCCGA CAAGTACCAC
CAGTTGGCCA ATCGCATCGA TGAAACCCTG GCGTTCATGC GTGCCTGTGG CCTGGACAGT
GCGCCGCAAC TGCGCGAAAC CAGCTTCTTC ACGGCTCACG AAGCGCTGCT GCTGAACTAT
GAAGAAGCCT TCGTGCGCCA GGACAGCCTG ACCGGCGACT ACTACGACTG CTCGGCGCAC
ATGCTGTGGA TCGGCGACCG CACCCGCCAG CTCGATGGGG CCCATGTGGA GTTCCTGCGT
GGCGTGCACA ACCCGATCGG GGTCAAGGTT GGCCCGAGCA TGAACCCCGA AGAGCTGATC
CGCCTGATCG ACACGCTCAA CCCGGCGAAC GACCCGGGGC GTTTGAACCT GATCGTGCGC
ATGGGCGCGG GCAAGGTTGG CAACCACTTG CCGGAGCTGA TCCGCACTGT CGAGCGCGAG
GGGCGCAAGG TGCTGTGGAG TTCCGATCCG ATGCACGGCA ACACCATCAA GGCCAGCAGC
GGTTACAAGA CCCGCGATTT TGCGCAGATT CTGGATGAGG TGAAGCAGTT CTTCCAGGTA
CACCAGGCCG AGGGCAGCCA TGCTGGCGGT ATCCATATCG AGATGACTGG GCAGAACGTC
ACCGAATGCA TCGGCGGTGC GCGGCCGATC ACCGAGGATG CGTTGTCTGA CCGGTATCAC
ACCCATTGTG ATCCGCGGAT GAATGCTGAT CAGTCGCTGG AGTTGGCATT CCTGATTGCC
GAAACCCTCA AGCAGGTACG GCGCTGA
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| Protein sequence | MNQPWSPDSW RALPIQQQPT YPDAAHLLKV EQTLASYPPL VFAGEARELR RQFAEVTEGR
AFLLQGGDCA ESFAEFSAAK IRDTFKVLLQ MAIVMTFAAG CPVVKVGRMA GQFAKPRSSG
DETIGDITLP AYRGDIVNGI GFDAKSRIPD PERLLQAYHQ ATASLNLLRA FAQGGFADLH
QVHKWNLDFI ANSALADKYH QLANRIDETL AFMRACGLDS APQLRETSFF TAHEALLLNY
EEAFVRQDSL TGDYYDCSAH MLWIGDRTRQ LDGAHVEFLR GVHNPIGVKV GPSMNPEELI
RLIDTLNPAN DPGRLNLIVR MGAGKVGNHL PELIRTVERE GRKVLWSSDP MHGNTIKASS
GYKTRDFAQI LDEVKQFFQV HQAEGSHAGG IHIEMTGQNV TECIGGARPI TEDALSDRYH
THCDPRMNAD QSLELAFLIA ETLKQVRR
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