| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_3848 |
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| Symbol | |
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| ID | 5190761 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 4329346 |
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| End bp | 4330131 |
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| Gene Length | 786 bp |
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| Protein Length | 261 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640588320 |
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| Product | hypothetical protein |
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| Protein accession | YP_001269156 |
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| Protein GI | 148549054 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0421] Spermidine synthase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.0392798 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.107844 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCGTTT TTGCGCAGGC GGTGGTGGAC ATGACGGCGG AACGGCAAGA GCGGCTGCTG
GCACGGGTGG AAGATGCGTT TGGCGTCATC AGCGTGTACG AAGTAGACGA CTACCGCTTT
CTGGAATTCG GCGATGCGAT CGAGCAAAGC TGTGTGTTCA CCGCCGACCC CAGCTGGCTG
GAGTACGACT ACACCCGCGC CATGCTGGTG GGGGCGCTGT GCCACGAACT GCCTGAGAGT
GCACTGTTTC TGGGCCTGGG CGCCGGCACG CTGACCCAGG CCTGCATGAA GTTCCTGCCG
TTGGAAGACA TCGAGGCCAT CGAGCTGCGC CCGGATGTGC CGCGCCTGGC CATGGATTAC
CTGGGCCTGG ACGACGACCC GCGGTTGTAT GTGCGCATCG GCGATGCCCT GGAGCTGCTG
CCCACGGCAG AGAAGGCCGA CCTGCTGTTC GTTGACTTGT ACACCGACCA TGGTCCTGGG
GTCGGGCACC TGGCGTGGAA CTTTCTGGAG AACTGCCAGC AGCACCTGAA CCCGGGCGGC
TGGCTGGTGA TCAACCAGTG GGCCACCGAT GATGGCAGGC CGCTGGGCGC GGCGTTGTTG
CGCGGGTTGT ACCACCGGCA TTACTGGGAA CTGCCTGTGA AGGAGGGCAA TGTGATTTTG
CTGGTGCCGG CAGACCTGGA GCAGTCGCTG GACCTGGACG GTTTGAGGGC CCGGGCCGAG
GCGCTGGCGC CGCGTTTGGG GTACAGCCTC GAGGGGCTGA TCCGCGAGAT TCGGCCGGCG
ACGTGA
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| Protein sequence | MRVFAQAVVD MTAERQERLL ARVEDAFGVI SVYEVDDYRF LEFGDAIEQS CVFTADPSWL
EYDYTRAMLV GALCHELPES ALFLGLGAGT LTQACMKFLP LEDIEAIELR PDVPRLAMDY
LGLDDDPRLY VRIGDALELL PTAEKADLLF VDLYTDHGPG VGHLAWNFLE NCQQHLNPGG
WLVINQWATD DGRPLGAALL RGLYHRHYWE LPVKEGNVIL LVPADLEQSL DLDGLRARAE
ALAPRLGYSL EGLIREIRPA T
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