| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_3844 |
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| Symbol | |
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| ID | 5191848 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 4324590 |
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| End bp | 4325477 |
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| Gene Length | 888 bp |
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| Protein Length | 295 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640588316 |
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| Product | heat shock protein HtpX |
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| Protein accession | YP_001269152 |
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| Protein GI | 148549050 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0501] Zn-dependent protease with chaperone function |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.00537908 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.388849 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGCGCA TTCTGTTGTT TGTAGCCACC AACCTCGCGG TGGTGCTGGT TGCAAGCATT
ACCCTGAGCC TGTTCGGTTT CAACGGGTTC ATGGCCGCCA ACGGGGTCGA CCTGAACCTC
AGCAGCCTGC TGGTGTTCTG CGCCGTGTTC GGCTTTGCCG GCTCCCTCGT CTCGCTGTTC
ATCTCCAAGT GGATGGCGAA GATGACCACC GGCACCCAGA TCATCAGCCA GCCGCGCACC
CGCCACGAGC AGTGGCTGCT GCAAACGGTC GAAGAGCTGT CCCGCGAAGC GGGCATCAAA
ATGCCTGAAG TGGGTATCTT CCCGGCTTAC GAGGCCAACG CCTTCGCCAC CGGCTGGAAC
CGCAACGACG CGCTGGTCGC AGTGTCCCAG GGCCTGCTGG AGCGCTTCTC GCCCGATGAA
GTGCGTGCGG TACTGGCCCA CGAAATTGGC CACGTTGCCA ACGGCGACAT GGTCACCCTG
GCGCTGGTGC AGGGCGTGGT GAACACCTTC GTGATGTTCT TTGCCCGCAT CATCGGCAAC
TTTGTCGACA AGGTAATCTT CAAGAACGAA GAGGGCCAAG GCATTGCCTA CTATGTAGCA
ACCATCGTTG CCGAGCTGAT CCTTGGCATC CTGGCCAGCA TGATCGTGAT GTGGTTCTCG
CGCCGCCGCG AATTCCGCGC AGACGAAGCC GGTGCGCAAC TGGCCGGTAC TGCGGCAATG
ATCGGCGCCC TGCAGCGCCT GCGCGTGGAA CAAGGCCTGC CAGTGCACAT GCCTGACACC
ATGAAGGCTT TCGGCATCAA TGGCGGCCTC AAGCACGGCC TGGCAGGGTT GCTGATGAGC
CACCCGCCGC TGGAAGAACG CATTGAGGCC CTGCGCCGCC GCGGCTGA
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| Protein sequence | MMRILLFVAT NLAVVLVASI TLSLFGFNGF MAANGVDLNL SSLLVFCAVF GFAGSLVSLF
ISKWMAKMTT GTQIISQPRT RHEQWLLQTV EELSREAGIK MPEVGIFPAY EANAFATGWN
RNDALVAVSQ GLLERFSPDE VRAVLAHEIG HVANGDMVTL ALVQGVVNTF VMFFARIIGN
FVDKVIFKNE EGQGIAYYVA TIVAELILGI LASMIVMWFS RRREFRADEA GAQLAGTAAM
IGALQRLRVE QGLPVHMPDT MKAFGINGGL KHGLAGLLMS HPPLEERIEA LRRRG
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