| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_3841 |
|---|
| Symbol | |
|---|
| ID | 5192629 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida F1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009512 |
|---|
| Strand | - |
|---|
| Start bp | 4322021 |
|---|
| End bp | 4322509 |
|---|
| Gene Length | 489 bp |
|---|
| Protein Length | 162 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 640588313 |
|---|
| Product | glutathione peroxidase |
|---|
| Protein accession | YP_001269149 |
|---|
| Protein GI | 148549047 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0386] Glutathione peroxidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.0688357 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.342172 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGCAA CGATGCTGAA CATCCCCTGC GTGACCCTGA GCGGCGAGCA CAAGACGCTG
GGCGACTTCC CGGGCAAGGT GCTGTTGGTG GTCAATACCG CCAGCCAGTG CGGTTTTACC
CCGCAGTACA AGGGCCTGGA ACAACTGTGG CAGGCCTACC GCGACCGTGG TCTGGTGGTA
CTGGGCTTTC CGTGCAACCA GTTCGGCAAG CAGGAACCTG GCGATGCGCG GGACATTGCG
CAGTTCTGCG AGCGTAATTT CGGCGTGAGT TTTCCGCTGT TTCGCAAGGT CGAGGTCAAC
GGCCCGGGCG CTCACCCTCT GTTCGTCGAA CTCAAGCAAC GCGCCCCGGG TATTTTGGGT
AGCCAGAAGA TCAAGTGGAA CTTCACCAAG TTTCTGGTCG ACCCGGCCAG TGGCCAGGTC
ACGCGCTATG CCCCCTCCAC CAAGCCACAG GCCCTGCAGG CGGACATCGA GCGTTTGCTC
AGCCGCTGA
|
|---|
| Protein sequence | MAATMLNIPC VTLSGEHKTL GDFPGKVLLV VNTASQCGFT PQYKGLEQLW QAYRDRGLVV
LGFPCNQFGK QEPGDARDIA QFCERNFGVS FPLFRKVEVN GPGAHPLFVE LKQRAPGILG
SQKIKWNFTK FLVDPASGQV TRYAPSTKPQ ALQADIERLL SR
|
|---|
| |