Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_3840 |
Symbol | |
ID | 5194410 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | + |
Start bp | 4319674 |
End bp | 4322031 |
Gene Length | 2358 bp |
Protein Length | 785 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640588312 |
Product | histidine kinase |
Protein accession | YP_001269148 |
Protein GI | 148549046 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase [COG0784] FOG: CheY-like receiver |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0989388 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.369399 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTTGCGC AGCGCAAGGA ACGGGAAACC GGCTCGGGAC TCATGGATAT CAAGTTCACC AATCGCCTGT CATACAAGCA AGCCCGGTTG ACAGTCCTGG TCGGCTTCAT CCTGGGAACA TTGCTCAGTC TCATCCAGAT CGGCATCGAT TATGCCAGCG AAGACGCGTC CATCAACCGT GAAGTGAACG CGTTGCTGCA AATCAGCCAC AACCCGGCCT CGCGCATCGC CTACAACATC GACTCGGAAC TGGCGCTGGA GCTGACCCGC GGCCTGCTGC AGTCGCCGGC CGTCATCCGC GCACGGCTGA TCGACAACAA CGAAACGGTA CTGGCCGATG TCGAGCGGCC AAAACTGCAG GACCGCTCCC GGCCACTCAG CGACTTCCTG TTCGGCGAGC AACGCCAGTT CAAGGAGCGC CTGTACCTGA CCCACATGCC AGAGCAATAC CTGGGCACCC TGTACCTGGA CATCGACACC TTCGCCTTCG GCAGCCGCTT TCTCGACCGT GCCGGCATCA CCCTGCTCAA TGGCTTTGCC CGCAGCCTGG TGCTCACCGG CCTCCTGCTG GCGCTGTTCT ACATGATGCT GACCAAGCCG CTGGTGACGG TGATTGGCGC ACTCAGCGGC AGCGACCCGC GCAAACCCCG GCAAACGCGC CTGGAATGCC CACACGGACA TGAGCATGAC GAAATCGGCG TGCTGGTGAA GGTCGCCAAC CAGCAGTTCG TCAGCATGGC CACCGAGATC GAACAGCGGC GCACTGCGGA AAACCGTCTG ACCCAGTACC TGAACGAGCT GGAAGACATC GTGTCGGCGC GCACCAACGA GCTCAAGGCC AGCAACAGCA GCCTGAGCCT GTCCAACCAG GAGCTGGAAC AAGCCCGCAG CCGAGCGCTG GACATGGCCC AGGCTCGCGC CGCCTTCCTG GCCAACATGA GCCATGAAAT CCGCACCCCG CTCAACGGCA TGCTGGGCAT GATCGCCCTG GCGCTGGACA ACCCGCTGCC CAGCGAGCAA CGCCAGCAAC TGGCTATCGC CCATGACTCG GGCAAGGTGC TGGTAGAGCT GCTGAACGAT ATTCTCGACT TGTCCAAGTT CGATGCCGGC CAGCTGGAAC TGGAACGCAT TGCGTTCGAC ATGGGCTCGA TGGTGGAAGA CACCGCCAAC CTGCTGTCGC AGAACACCGC GCAAAGCGTG GAGCTGACCT GCCTGATCGC CAGCGACTTC CCCAGCAGCG TGCTCGGCGA CCCCACGCGT GTGCGGCAGA TCGTCAGCAA CCTGCTGTCC AACGCGCTGA AGTTCACCCG CTTCGGCCGT GTCGATGTGC GCTTGATGGC CATTGTCGGT GGTGTACGTC TTGAGGTACG GGATACCGGC ATCGGCATCC CCGAAGACGC CCAGGCGCGC ATCTTCCAGC CCTTCACCCA GGCCGGTGCC GGCATCACCC GCCAGTACGG TGGCACCGGC CTGGGCCTGG CGTTGACGCG CAACCTGTGC AAGGCCATGC AGGGCCACCT GCACATTCGC TCCGAGCCGG GCTTTGGCAG CTGTTTTACC GCCGAGTTGC CGCTGACCGT GCACACCGAA GCCATCCCGC CAGCGCCCTT GCATGGCCGC GTGGCCGCAC TGAGCGCAGC CGGCAGCGGG CTCAATGAAC TGTTGCAGCA CTTGCTGCCT GCCTGGGGCC TGACCTACCA GCGCCATGAC AGTTGCGCCA CGCTGGATGC CGCAGTGATC GACCTGTTGA TCACCGACGA CGTCGAGCAC CTGTTCGAAC TGCGCCCGGC ATTGAAAACC CCAATCCTGC TGGTGACTGC CTACGGCAAT TTCCTGCCCA ACGAGCAGTC CTTGGCCTTG GCCCCGCTGC ACCAGCTGGC CCGACCATTG GCACGCAACG CCCTGTACCA GACCCTGCGC CGCACCTTGC AAGGCCATGA GCCCGAACAC CCGCTGGCCA TCCCGGCCAT TACCCAGGAG CAAGGCCGTG CGAGGATCCT GCTGGTAGAG GACAACCCGG TGAACCAGCT GGTGGCCAAG GGCATGCTGG CCAAGCTCGG CTGCCAGGTG CAACTGGCCA CCCAGGGCGC GGAGGCCCTT GAGCTGCTGG CGCGTGAGGA ATTCGACCTG GTACTGATGG ACTGCAACAT GCCGGTGATG GACGGCTACG AGGCCAGCCG GCGTATCCGC CAAAGCGGCC GCTGGCCCGA GTTGCCGATC GTCGCCCTCA CCGCCAACGC CATGCCCGAA GAGCGCGAAC GCTGCCGGGC GGCGGGCATG AACGACTACC TGGCCAAGCC ATTCCGCCGC GAAGAGCTAC TGGCCCTGGT TGACCATTGG GTGCCCTTCA GCGGCTGA
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Protein sequence | MLAQRKERET GSGLMDIKFT NRLSYKQARL TVLVGFILGT LLSLIQIGID YASEDASINR EVNALLQISH NPASRIAYNI DSELALELTR GLLQSPAVIR ARLIDNNETV LADVERPKLQ DRSRPLSDFL FGEQRQFKER LYLTHMPEQY LGTLYLDIDT FAFGSRFLDR AGITLLNGFA RSLVLTGLLL ALFYMMLTKP LVTVIGALSG SDPRKPRQTR LECPHGHEHD EIGVLVKVAN QQFVSMATEI EQRRTAENRL TQYLNELEDI VSARTNELKA SNSSLSLSNQ ELEQARSRAL DMAQARAAFL ANMSHEIRTP LNGMLGMIAL ALDNPLPSEQ RQQLAIAHDS GKVLVELLND ILDLSKFDAG QLELERIAFD MGSMVEDTAN LLSQNTAQSV ELTCLIASDF PSSVLGDPTR VRQIVSNLLS NALKFTRFGR VDVRLMAIVG GVRLEVRDTG IGIPEDAQAR IFQPFTQAGA GITRQYGGTG LGLALTRNLC KAMQGHLHIR SEPGFGSCFT AELPLTVHTE AIPPAPLHGR VAALSAAGSG LNELLQHLLP AWGLTYQRHD SCATLDAAVI DLLITDDVEH LFELRPALKT PILLVTAYGN FLPNEQSLAL APLHQLARPL ARNALYQTLR RTLQGHEPEH PLAIPAITQE QGRARILLVE DNPVNQLVAK GMLAKLGCQV QLATQGAEAL ELLAREEFDL VLMDCNMPVM DGYEASRRIR QSGRWPELPI VALTANAMPE ERERCRAAGM NDYLAKPFRR EELLALVDHW VPFSG
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