| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_3836 |
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| Symbol | |
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| ID | 5190910 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 4315171 |
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| End bp | 4316259 |
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| Gene Length | 1089 bp |
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| Protein Length | 362 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640588303 |
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| Product | fimbrial protein-like protein |
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| Protein accession | YP_001269144 |
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| Protein GI | 148549042 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3539] P pilus assembly protein, pilin FimA |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.38252 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.631566 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCCGC CCCACACCCG CCGCCTGCGC CTGCTTGCCT TGACCCTCTG CAACCTCATG
CCCTGGCTGG TGGCGACCAG CGCGCAGGCC AACTGCAGCT GGGGCGCTGG CAGCGCAACC
TACATGACCT TCAAAAACCA GAAGGTCAGT TTTTCGATCC CGCGCGATGC ACCCGTCGGG
ACGCTCATCG GCGAGGCCAG TCTATACGCA AAAAATGACC AAGGGGCGAC CTTGACCTGC
TTCTATAACG CAGCCACCCC AGTCACTGCC AGGCTGCCCA ACAGCGCACC ACCGTTCGTC
GGCAGCCTGC CCCTCATGGG CAACAAGAAC GTGGATGGCA TGGTGATGCA GACCAACATC
AAGGGCGTGG GCGTTGCCAT CGATCTTGGC TTCCCCTTCA ATGGCAGTGC CGACAATACC
TTCACGCCCG ACGCAGGTAC TGGCATCCCC TACACCGGGA CCATGACCAG GCCGACCTCG
TTTAGCATGC CACTGGACAC AATCCGCGGC AGGGCCAGCT TCATCAAGAT TGGCGATATC
GACCCTGGGC CGCAAGAGGT CGACGTGGAG GTGTTCCATG GTTTCATCCA TGACTTAGGC
AAAGTCATGG ATTACAAGGT CCAGGCCACC ATCACCCGCG CACAGTGCTC CCTGGCAGGA
AACCAAGTGA ATCCCGGCCT TGTGAACATG GGGGAATACA GCATCGATGA CTTCAAGGGG
GTCGGCACGC CCCTAAATTC CGTTCCATTC CAGATCACCC TCAACAACTG CGTGGACAGC
AGTGCCCCAG GTGCCAAGCG TGCGGATATC CATCTGATGC TGGATACCAG CCAAGGCTCA
GTCCCCATCG ACCCCACCGA AGGCGTGTTC AGCATACTCC CGGGATCAGG CAGCGCCGAC
GGCGTCGGCA TCCAGATACT GCGCAGCGAC AACACCACAG CGATGCCCCT GCAGTCCGAG
CAGTTGATCA AGGAACTGGA TATTGGCCAA ACCGTGCTGC ATTTCAATGC CCGCTACGTG
CAGACCGAGG CCCGGGTGAC ACCTGGCGTG GCCGCTGGCG CGCTGAACTT CACCGTTCAC
TACCGTTGA
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| Protein sequence | MTPPHTRRLR LLALTLCNLM PWLVATSAQA NCSWGAGSAT YMTFKNQKVS FSIPRDAPVG
TLIGEASLYA KNDQGATLTC FYNAATPVTA RLPNSAPPFV GSLPLMGNKN VDGMVMQTNI
KGVGVAIDLG FPFNGSADNT FTPDAGTGIP YTGTMTRPTS FSMPLDTIRG RASFIKIGDI
DPGPQEVDVE VFHGFIHDLG KVMDYKVQAT ITRAQCSLAG NQVNPGLVNM GEYSIDDFKG
VGTPLNSVPF QITLNNCVDS SAPGAKRADI HLMLDTSQGS VPIDPTEGVF SILPGSGSAD
GVGIQILRSD NTTAMPLQSE QLIKELDIGQ TVLHFNARYV QTEARVTPGV AAGALNFTVH
YR
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