| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_3825 |
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| Symbol | |
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| ID | 5191059 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 4288287 |
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| End bp | 4289024 |
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| Gene Length | 738 bp |
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| Protein Length | 245 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640588292 |
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| Product | pili assembly chaperone |
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| Protein accession | YP_001269133 |
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| Protein GI | 148549031 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3121] P pilus assembly protein, chaperone PapD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCACCCC TTTCTCGACT TCTGATCACC TCATGCAGCT GCCTGGCGCT GCTCACAGCC
ATTCTCCCCG GCGCACAAGC GGCACTCACC ATCAGCCACA CGCGAGTGGT GCACGACAGC
GCCAAACGCA GCTCCTCGGT CATCGTCGCC AACCCCTCCA ACAGGCCGTA CGCGGCGCAG
GCCTGGGTCA ACACCGAAGC CGACGACGCA ACCACTGCCG TCCCCCTGAT CGCTGCCCCT
AACCTGTTCC GCCTCGACCC CGGTGGCGAA CAGACGGTGC AAATCAATGC CCTGCCTAAC
GATCTCCCCC GTGATCGTGA GTCCGTGTTC TATTTCAACC TGCAGGAAAT ACCGCAGGCA
GCGACCAATG ACGGAGAGAA CATCCTCAAC ATCGCCCTGC GCACGCGCAT CAAGCTGTTC
TATCGACCCA GTGAGCTCAA AGGCCGCCCG CAAGACCGGT TGAAAGACCT GGCCTGGTCA
GTGCAACAAA TAGATGGAAA ACCGCATCTG GTCGTCGATA ACCCGTCGCC TTATTACTTC
ACCTTCAGCC GCCTGGTGGT AAGTGGCAAT GGCGCGAGTG AAACCATCAA CGCCAAGGCC
ATGGCCTTGC CCCTGGGCAC GCAGGCCTAT GCACTGAACA CCATGACAGT CACCGATGGG
CTGCAGGTGA AGTTCACCAC GATCAGTGAC TACAGTGGCA TAACTGCAGA GGTCTCCAGC
CCGGTCGCAA GGCCGTGA
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| Protein sequence | MSPLSRLLIT SCSCLALLTA ILPGAQAALT ISHTRVVHDS AKRSSSVIVA NPSNRPYAAQ
AWVNTEADDA TTAVPLIAAP NLFRLDPGGE QTVQINALPN DLPRDRESVF YFNLQEIPQA
ATNDGENILN IALRTRIKLF YRPSELKGRP QDRLKDLAWS VQQIDGKPHL VVDNPSPYYF
TFSRLVVSGN GASETINAKA MALPLGTQAY ALNTMTVTDG LQVKFTTISD YSGITAEVSS
PVARP
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