Gene Pput_3800 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_3800 
SymbolfabG 
ID5194887 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp4262618 
End bp4263358 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content63% 
IMG OID640588267 
Product3-ketoacyl-(acyl-carrier-protein) reductase 
Protein accessionYP_001269108 
Protein GI148549006 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID[TIGR01830] 3-oxoacyl-(acyl-carrier-protein) reductase 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.581325 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCTGC AAGGTAAAGT TGCACTGGTT ACCGGCGCCA GCCGTGGTAT TGGTCAGGCC 
ATCGCCCTCG AGCTGGGCCG CCAGGGCGCG ACCGTGATCG GTACCGCCAC GTCGGCGTCC
GGTGCCGAGC GCATCGCTGC CACCCTGAAA GAACACGGCA TTACCGGCAC TGGCATGGAG
CTGAACGTGA CCAGCGCCGA ATCGGTTGAA GCCGTACTGG GCGCCATTGG CGAGCAGTTC
GGCGCGCCGG CCATCTTGGT CAACAATGCC GGTATCACCC GCGACAACCT CATGCTGCGC
ATGAAAGACG ACGAGTGGTT TGATGTCATC GACACCAACC TGAACAGCCT CTACCGTCTG
TCCAAGGGCG TGCTGCGTGG CATGACCAAG GCGCGTTGGG GTCGTATCAT CAGCATCGGC
TCGGTCGTTG GTGCCATGGG TAACGCAGGT CAGGCCAACT ACGCGGCTGC CAAGGCCGGT
CTGGAAGGTT TCAGCCGCGC CCTGGCGCGT GAAGTGGGTT CGCGTGGTAT CACCGTCAAC
TCGGTGACCC CAGGCTTCAT CGATACCGAC ATGACCCGCG AGCTGCCAGA AGCTCAGCGC
GAAGCCCTGC AGACCCAGAT TCCGCTGGGC CGCCTGGGCC AGGCTGACGA AATTGCCAAG
GTGGTTTCGT TCCTGGCGTC CGACGGCGCC GCCTACGTGA CCGGCGCTAC CGTGCCGGTC
AACGGCGGGA TGTACATGTA A
 
Protein sequence
MSLQGKVALV TGASRGIGQA IALELGRQGA TVIGTATSAS GAERIAATLK EHGITGTGME 
LNVTSAESVE AVLGAIGEQF GAPAILVNNA GITRDNLMLR MKDDEWFDVI DTNLNSLYRL
SKGVLRGMTK ARWGRIISIG SVVGAMGNAG QANYAAAKAG LEGFSRALAR EVGSRGITVN
SVTPGFIDTD MTRELPEAQR EALQTQIPLG RLGQADEIAK VVSFLASDGA AYVTGATVPV
NGGMYM