Gene Pput_3797 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_3797 
Symbol 
ID5194779 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp4259931 
End bp4260746 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content63% 
IMG OID640588264 
Product4-amino-4-deoxychorismate lyase 
Protein accessionYP_001269105 
Protein GI148549003 
COG category[E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism 
COG ID[COG0115] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase 
TIGRFAM ID[TIGR03461] aminodeoxychorismate lyase 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.172255 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.333642 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACAGCT GGATCGACGG CCAGCCGGCG ACTGCACTCA ACCTGCAGAA CCGCGGCCTG 
GCCTACGGCG ATGGCCTGTT CGAAACCATC GCCGTGCGAG GTGCCCGGCC CAGCTTGCTG
GACGGCCACC TTGCACGCCT GGCACTGGGC TGCCAGCGTT TGGCGATCAA CACCGATCTG
GCGCTGGTGC GCGACGAGCT GCTGCGTTAC GCCAGCCAGC TGGGTGAGGG TGTCGTCAAA
CTCATCCTTA CCCGTGGCGA TAGCCAGCGT GGCTATGCGC CAGCTGTCGA TGCAGCGCCG
CGGCGTATCC TGCAAGGCAG TCCATTACCC CGTTATCCTG TCGAGCATGC CGAGCATGGC
GTGCGTTTGT TCCCTTGCCA GACCCGGCTT GGGGAACAAC CACTGTTGGC CGGTCTCAAA
CACCTTAACC GCCTGGAGCA GGTGCTGGCC CGTGCCGAAT GGCAGGACAG CGTCCATGCC
GAAGGCCTGA TGCGTGACGC GCAGGGCAGG GTGATCGAAG GGGTATACAG CAATCTGTTT
CTGGTGCGTG ATGGCGTGCT GCTTACCGCC GACCTTAGCC GTTGTGGCGT GGCGGGCGTG
ATGCGTGCCG CACTGCTGGA ACAGGCCCCG CTGCTGGGTA TTGCGGCACA CGTCTGCGAC
CTGTCGTTCG AGGCGCTTGA GCAAGCGGAT GAAGTATTTG TTTGCAATAG CGTTTACGGC
ATTTGGCCCG TGTGTGGCGT AGCCGCGCTA AACTGGTCGC CGGGCCCGCT CACTCGTAAA
CTGCAGGCCG TTGCCCGTAC GTTACTGGAA ACCTGA
 
Protein sequence
MHSWIDGQPA TALNLQNRGL AYGDGLFETI AVRGARPSLL DGHLARLALG CQRLAINTDL 
ALVRDELLRY ASQLGEGVVK LILTRGDSQR GYAPAVDAAP RRILQGSPLP RYPVEHAEHG
VRLFPCQTRL GEQPLLAGLK HLNRLEQVLA RAEWQDSVHA EGLMRDAQGR VIEGVYSNLF
LVRDGVLLTA DLSRCGVAGV MRAALLEQAP LLGIAAHVCD LSFEALEQAD EVFVCNSVYG
IWPVCGVAAL NWSPGPLTRK LQAVARTLLE T