Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_3797 |
Symbol | |
ID | 5194779 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 4259931 |
End bp | 4260746 |
Gene Length | 816 bp |
Protein Length | 271 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640588264 |
Product | 4-amino-4-deoxychorismate lyase |
Protein accession | YP_001269105 |
Protein GI | 148549003 |
COG category | [E] Amino acid transport and metabolism [H] Coenzyme transport and metabolism |
COG ID | [COG0115] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase |
TIGRFAM ID | [TIGR03461] aminodeoxychorismate lyase |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.172255 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.333642 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCACAGCT GGATCGACGG CCAGCCGGCG ACTGCACTCA ACCTGCAGAA CCGCGGCCTG GCCTACGGCG ATGGCCTGTT CGAAACCATC GCCGTGCGAG GTGCCCGGCC CAGCTTGCTG GACGGCCACC TTGCACGCCT GGCACTGGGC TGCCAGCGTT TGGCGATCAA CACCGATCTG GCGCTGGTGC GCGACGAGCT GCTGCGTTAC GCCAGCCAGC TGGGTGAGGG TGTCGTCAAA CTCATCCTTA CCCGTGGCGA TAGCCAGCGT GGCTATGCGC CAGCTGTCGA TGCAGCGCCG CGGCGTATCC TGCAAGGCAG TCCATTACCC CGTTATCCTG TCGAGCATGC CGAGCATGGC GTGCGTTTGT TCCCTTGCCA GACCCGGCTT GGGGAACAAC CACTGTTGGC CGGTCTCAAA CACCTTAACC GCCTGGAGCA GGTGCTGGCC CGTGCCGAAT GGCAGGACAG CGTCCATGCC GAAGGCCTGA TGCGTGACGC GCAGGGCAGG GTGATCGAAG GGGTATACAG CAATCTGTTT CTGGTGCGTG ATGGCGTGCT GCTTACCGCC GACCTTAGCC GTTGTGGCGT GGCGGGCGTG ATGCGTGCCG CACTGCTGGA ACAGGCCCCG CTGCTGGGTA TTGCGGCACA CGTCTGCGAC CTGTCGTTCG AGGCGCTTGA GCAAGCGGAT GAAGTATTTG TTTGCAATAG CGTTTACGGC ATTTGGCCCG TGTGTGGCGT AGCCGCGCTA AACTGGTCGC CGGGCCCGCT CACTCGTAAA CTGCAGGCCG TTGCCCGTAC GTTACTGGAA ACCTGA
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Protein sequence | MHSWIDGQPA TALNLQNRGL AYGDGLFETI AVRGARPSLL DGHLARLALG CQRLAINTDL ALVRDELLRY ASQLGEGVVK LILTRGDSQR GYAPAVDAAP RRILQGSPLP RYPVEHAEHG VRLFPCQTRL GEQPLLAGLK HLNRLEQVLA RAEWQDSVHA EGLMRDAQGR VIEGVYSNLF LVRDGVLLTA DLSRCGVAGV MRAALLEQAP LLGIAAHVCD LSFEALEQAD EVFVCNSVYG IWPVCGVAAL NWSPGPLTRK LQAVARTLLE T
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