| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_3793 |
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| Symbol | |
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| ID | 5195352 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 4256272 |
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| End bp | 4257054 |
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| Gene Length | 783 bp |
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| Protein Length | 260 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640588260 |
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| Product | TatD family hydrolase |
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| Protein accession | YP_001269101 |
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| Protein GI | 148548999 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0084] Mg-dependent DNase |
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| TIGRFAM ID | [TIGR00010] hydrolase, TatD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.23197 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.246181 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCGTAG ATTCCCATTG CCACCTCGAC CGTCTTGACC TCAGTGCCCA CCAGGGCTCC
CTCGATGCTG CCCTGCAGGC GGCGCGTGAG CGTGGGGTCG GGCATTTCCT GTGCATTGGC
GTCAGTGCCG AGAATGCGGG TGCAGTGAAG GCGCTGAGCG AGCAGTATGC TGACGTCGAC
TGCTCGGTGG GCGTGCACCC GCTGGACCTG GCCCCTGGCG AAACCCCGGC GTTGGAGTGG
CTGTTGCGCG AATTGGCCCA CCCGCATGTG GTGGCGATTG GTGAAACCGG GCTGGATTAC
CACTATGAGC CAGAGGCGGC AGAGCTGCAG CAGGCTTCGT TCCGCCTGCA CCTTGAGGCC
TCCAGGCAGA CCGGCAAGCC GGTGATCGTG CATACCCGGG CGGCGCGCGC CGATACCCTG
GCGCTGCTGC GTGAGGCGAG CCTGCCGCAA GCGGGCGTGC TGCACTGCTT CACCGAAGAC
TGGGACATGG CCAAGGCGGC GCTGGACCTG GGTTATTACA TTTCGCTGTC GGGCATCGTG
ACCTTCCGCA ATGCCGATGC CTTGCGGGAA GTGGCGCGGC AGGTGCCTGT CGATCGCTTG
CTGGTGGAGA CCGATTCGCC CTACCTGGCG CCGATTCCGC ACCGGGGCAA GCCGAACCTG
CCGCAGTATG TACGGGAGGT GGCGGAGTAT GTGGCTTCGT TGCGTGGGGC CAGTTATGAG
CAGTTGGCCG AGCAGACTAC CGCCAACTTC AAGCGGCTGT TCCCGCTGGC GCGTGTGGAT
TGA
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| Protein sequence | MLVDSHCHLD RLDLSAHQGS LDAALQAARE RGVGHFLCIG VSAENAGAVK ALSEQYADVD
CSVGVHPLDL APGETPALEW LLRELAHPHV VAIGETGLDY HYEPEAAELQ QASFRLHLEA
SRQTGKPVIV HTRAARADTL ALLREASLPQ AGVLHCFTED WDMAKAALDL GYYISLSGIV
TFRNADALRE VARQVPVDRL LVETDSPYLA PIPHRGKPNL PQYVREVAEY VASLRGASYE
QLAEQTTANF KRLFPLARVD
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