Gene Pput_3787 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_3787 
Symbol 
ID5195384 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp4250055 
End bp4251251 
Gene Length1197 bp 
Protein Length398 aa 
Translation table11 
GC content64% 
IMG OID640588253 
Productaromatic amino acid aminotransferase 
Protein accessionYP_001269095 
Protein GI148548993 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1448] Aspartate/tyrosine/aromatic aminotransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0972413 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.500681 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCTGT TTTCCGCTGT CGAGCTGGCA CCCCGCGACC CTATTCTGGG CCTCAACGAA 
GCATTCAACG CCGACCCACG TACCGACAAG GTCAACCTGG GCGTAGGCGT GTATTGCAAT
GAGGAGGGCC GCATTCCGCT GCTGCGCGCC GTGACCGAAG CCGAAACCCA GCGTGCCGCC
CAGCACGCTT CGCGCGGCTA CCTGCCGATC GACGGCATCG CCACCTACGA CCAGGCTGTG
CAGAAGCTGC TGTTCGGCGC CGAGTCGCCA CTGCTGGCCG CCGGCCGCGT GGTCACCGTG
CAGGCCGTCG GTGGTACCGG CGCCCTGAAG ATCGGTGCCG ACTTCCTCAA GCGCCTCTCG
CCCAACGCCG TGGTTGCCAT CAGCGACCCT AGCTGGGAAA ACCACCGTGC GCTGTTCGAA
TCGGCCGGCT TCCCGGTGCA GACCTACCGC TACTACGATG CGCCAACCAA CGACGTCAAC
CGCGCTGGCA TGCTCGAAGA CCTCAACGCC CTGCCGTCCG GCTCGATCGT GGTGCTGCAC
GCCTGCTGCC ACAACCCGAC CGGTGTCGAC CTGAACCTGG ACGACTGGAA GAACGTCCTG
GAAGTGGTCA AGGCCAAGGG CCACGTGCCG TTCCTCGACA TGGCCTACCA GGGCTTTGGT
GACGGTATCG CCGAAGACGC CTTCGCCGTG CGCCTGTTCG CCGAGTCGGG CCTGGAGTTC
TTTGTTTCCA GCTCGTTCTC CAAATCGTTC TCGCTGTACG GCGAGCGCGT CGGCGCACTG
TCGATCGTCA CCGCCTCCAA GGACGAGAGC ACCCGCGTGC TGTCGCAGGT CAAGCGCGTG
ATCCGCACCA CCTACTCCAA CCCGCCAACC CACGGCGCAA CCATTGTTGC CACCGTGCTG
AACAGCGCAG AACTGCGCCA GATGTGGGAA ACCGAATTGG CCGAAATGCG TGAACGCATC
CACGGCATGC GCAAGCAGAT GGTATCGCTG CTGGCCGAAT ACGGTGCCAA CCGCGACTTC
AGCTTCGTTG GCCGCCAGGT CGGCATGTTC TCCTACTCGG GCCTGACCGT TGAACAGGTC
GCCCGCCTGA AGAACGACTT CGGCATCTAT GCCCTGGACA CCGGCCGTAT CGCGGTGGCC
GCGCTGAACC AGAGCAACAT CCACGTGGTG ACCAAAGCGA TCGTGGAAGT GCTGTAA
 
Protein sequence
MSLFSAVELA PRDPILGLNE AFNADPRTDK VNLGVGVYCN EEGRIPLLRA VTEAETQRAA 
QHASRGYLPI DGIATYDQAV QKLLFGAESP LLAAGRVVTV QAVGGTGALK IGADFLKRLS
PNAVVAISDP SWENHRALFE SAGFPVQTYR YYDAPTNDVN RAGMLEDLNA LPSGSIVVLH
ACCHNPTGVD LNLDDWKNVL EVVKAKGHVP FLDMAYQGFG DGIAEDAFAV RLFAESGLEF
FVSSSFSKSF SLYGERVGAL SIVTASKDES TRVLSQVKRV IRTTYSNPPT HGATIVATVL
NSAELRQMWE TELAEMRERI HGMRKQMVSL LAEYGANRDF SFVGRQVGMF SYSGLTVEQV
ARLKNDFGIY ALDTGRIAVA ALNQSNIHVV TKAIVEVL