| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_3786 |
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| Symbol | |
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| ID | 5195395 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 4247755 |
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| End bp | 4249770 |
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| Gene Length | 2016 bp |
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| Protein Length | 671 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640588252 |
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| Product | excinuclease ABC subunit B |
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| Protein accession | YP_001269094 |
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| Protein GI | 148548992 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0556] Helicase subunit of the DNA excision repair complex |
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| TIGRFAM ID | [TIGR00631] excinuclease ABC, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0506732 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.459587 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGAGT TCCAGCTCGT CACACGTTTC CAGCCGGCTG GCGACCAGCC CGAGGCTATC
CGCCAGTTGG TCGAAGGCAT AGAGGCGGGG CTGTCGCACC AGACGTTGCT CGGGGTGACC
GGTTCGGGCA AGACCTTCAG CATTGCCAAC GTCATCCAGC AGGTGCAGCG CCCGACGCTG
GTGCTGGCGC CCAACAAGAC GCTGGCCGCC CAGTTGTACG GGGAGTTCAA GGCATTCTTC
CCCAACAACG CGGTGGAGTA CTTCGTTTCC TATTACGACT ACTACCAGCC GGAAGCCTAC
GTGCCGTCGT CGGACACCTT CATCGAGAAG GACGCCTCGA TCAACGACCA CATCGAGCAG
ATGCGCCTGT CGGCGACCAA GGCGCTGCTG GAGCGGCGTG ACGCGATCAT CGTGACCACC
GTGTCGTGCA TCTACGGCCT GGGCAGCCCC GAGACCTACC TGAAAATGGT TCTGCACGTG
GACCGTGGCG ACAAGCTCGA CCAGCGCGCG CTGCTGCGCC GGTTGGCCGA CCTGCAGTAC
ACCCGCAACG AAATGGACTT TGCCCGCGCC ACCTTCCGGG TACGCGGTGA CGTGATCGAC
ATCTTCCCGG CCGAATCGGA TCTGGAAGCC ATCCGCATCG AGCTGTTCGA TGATGAAGTG
GAGAACATCG CCGCCTTCGA TCCGTTGACC GGCGAGGTTT TCCGCAAGCT GCCACGTTTC
ACGTTCTACC CCAAGAGCCA CTACGTCACC CCGCGGGAAA CGCTGCTTGA AGCAGTGGAG
GGCATCAAGG AAGAACTGAA GGAGCGTCTG GAGTACCTGC ACAAGGCCAA CAAGCTGGTC
GAAGCGCAGC GTCTGGAGCA ACGTACCCGC TTCGATCTGG AGATGATCCT CGAGCTGGGC
TACTGCAACG GCATCGAAAA CTACTCGCGC TACCTGTCCG GGCGTCCGGC CGGGGCGCCG
CCGCCCACCC TGTACGATTA CCTGCCGCCT GATGCGCTGC TGGTGATCGA CGAATCACAC
GTCAGCGTTC CGCAGGTCGG CGCCATGTAC AAGGGCGACC GTTCACGCAA GGAGACCCTG
GTCGAGTACG GCTTCCGCAT GCCTTCAGCG CTGGACAACC GGCCGATGCG TTTCGACGAG
TGGGAGGATG TCAGCCCGCA GACCATTTTC GTTTCGGCCA CTCCGGGGCC CTACGAGGCT
GAGCATGCCG GGCGCGTGGT GGAGCAGGTG GTGCGCCCGA CCGGGCTGGT CGACCCGCAG
GTAGAGGTGC GCCCGGCGCT GACCCAGGTC GACGACCTGC TGTCCGAGAT CCGCAAGCGT
GTCGCGGCAG GCGAGCGAGT GCTGGCGACC ACGTTGACCA AACGCATGGC CGAGGACCTC
AGCGATTACC TGGCCGACCA CGACGTGCGG GTACGCTACC TGCACTCGGA CATCGACACG
GTGGAGCGGG TGGAGATTAT CCGTGACCTG CGCCTGGGCA CCTTCGACGT GCTGGTGGGC
ATCAACCTGC TGCGCGAGGG CCTGGACATG CCCGAGGTGT CGCTGGTGGC TATCCTCGAT
GCGGACAAGG AAGGTTTTCT GCGTTCCGAG CGCTCCCTGA TCCAGACCAT TGGCCGCGCG
GCACGTAACC TCAATGGCCG GGCCATTCTG TACGCCGATA ACGTAACAGG TTCGATGCAG
CGGGCCATTG ACGAAACCGA GCGTCGCCGC GAGAAGCAGA TCGCCTTCAA CGAAGCCAAC
GGCATCGTGC CCAAGGGCGT GGTCAAGGAC ATCACCGACA TCATGGAGGG TGCCGCCGTG
CCCGGTGCGC GCAGCAAGAA GCGCAAGGGC ATGGCCAAGG CGGCGGAGGA GAGCGCCCGT
TACGAGGCCG AACTGCGTAC GCCGGGCGAG ATCACCAAGC GCATCAAGCA GTTGGAAGAG
AAAATGATGC AGTTCGCCCG CGACCTGGAG TTCGAAGCTG CGGCGCAGCT GCGTGACGAG
ATTGCGCAGC TGCGGGAGCG GTTGATTAGC AGCTGA
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| Protein sequence | MSEFQLVTRF QPAGDQPEAI RQLVEGIEAG LSHQTLLGVT GSGKTFSIAN VIQQVQRPTL
VLAPNKTLAA QLYGEFKAFF PNNAVEYFVS YYDYYQPEAY VPSSDTFIEK DASINDHIEQ
MRLSATKALL ERRDAIIVTT VSCIYGLGSP ETYLKMVLHV DRGDKLDQRA LLRRLADLQY
TRNEMDFARA TFRVRGDVID IFPAESDLEA IRIELFDDEV ENIAAFDPLT GEVFRKLPRF
TFYPKSHYVT PRETLLEAVE GIKEELKERL EYLHKANKLV EAQRLEQRTR FDLEMILELG
YCNGIENYSR YLSGRPAGAP PPTLYDYLPP DALLVIDESH VSVPQVGAMY KGDRSRKETL
VEYGFRMPSA LDNRPMRFDE WEDVSPQTIF VSATPGPYEA EHAGRVVEQV VRPTGLVDPQ
VEVRPALTQV DDLLSEIRKR VAAGERVLAT TLTKRMAEDL SDYLADHDVR VRYLHSDIDT
VERVEIIRDL RLGTFDVLVG INLLREGLDM PEVSLVAILD ADKEGFLRSE RSLIQTIGRA
ARNLNGRAIL YADNVTGSMQ RAIDETERRR EKQIAFNEAN GIVPKGVVKD ITDIMEGAAV
PGARSKKRKG MAKAAEESAR YEAELRTPGE ITKRIKQLEE KMMQFARDLE FEAAAQLRDE
IAQLRERLIS S
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