Gene Pput_3783 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_3783 
SymbolgltX 
ID5195269 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp4243407 
End bp4244888 
Gene Length1482 bp 
Protein Length493 aa 
Translation table11 
GC content62% 
IMG OID640588249 
Productglutamyl-tRNA synthetase 
Protein accessionYP_001269091 
Protein GI148548989 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0008] Glutamyl- and glutaminyl-tRNA synthetases 
TIGRFAM ID[TIGR00464] glutamyl-tRNA synthetase, bacterial family 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.585828 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACCG TACGCACGCG TATTGCGCCA TCGCCTACCG GCGACCCCCA TGTCGGCACT 
GCCTACATCG CCCTGTTCAA CTACTGCTTT GCCAAGCAGC ACGGCGGTGA GTTCATCCTG
CGCATCGAAG ACACCGATCA GCTGCGCTCC ACGCGTGAGT CGGAGCAACA GATCTTCGAC
GCCCTGCGCT GGCTTGGCAT CGAATGGAAC GAAGGCCCGG ATGTCGGCGG CCCGCACGGC
CCTTACCGGC AGAGCGAGCG TGGCGAAATC TACGCCAAAT ACGCTAAAGA GCTGGTAGAC
GCCGGCCACG CCTTCTACTG CTTCTGCACC GCCGAAGAGC TGGAGCAGAT GCGTGCCGAG
CAGCAGGCTC GCGGCGAAAC CCCGCGTTAC GATGGCCGTG CATTGCTGCT GAGCGCCGAA
GAAGTGCAGC GCCGCCTGGA CGCTGGCGAG CCGCACGTGA TCCGCATGAA GGTGCCGAGC
GAGGGTATCT GCGTGGTGCC GGACATGCTG CGCGGCGATG TCGAGATCCC GTGGGACCGC
ATGGACATGC AGGTACTGAT GAAGAACGAC GGCCTGCCGA CGTACTTCCT GGCCAACGTG
GTCGACGACC ACCTGATGGG CATCACCCAC GTGCTGCGTG GTGAAGAGTG GCTGCCATCG
GCGCCCAAGC TGATCAAGCT GTACGAGTAC TTCGGCTGGG AGCAGCCCAA GCTGTGCTAC
ATGCCGCTGC TGCGCAACCC GGACAAATCC AAACTGTCCA AGCGCAAGAA CCCGACCTCG
GTCACCTTCT ACGAGCGCAT GGGCTTCATG CCTGAAGCGA TGCTCAACTA CCTTGGCCGC
ATGGGCTGGT CGATGCCTGA CGAGCGCGAG AAGTTCTCGC TGGCCGAAAT GGTCGAGCAC
TTCGACCTGT CGCGTATCTC GCTGGGCGGC CCGATCTTTG ACATCGAGAA GCTGTCCTGG
CTCAACGGCC AGTGGCTGCG CGAGCTGCCG GTAGAGGAAT TCGCCGCACG CCTGCAGAAA
TGGGCATTCA ACAGCGACTA CATGATGAAG ATTGCCCCGC ACGTGCAGGG CAGGGTCGAA
ACCTTCAGCC AGGTTGCCCC GTTGGGCGGG TTCTTCTTCG AAGGCGCACT CAAGCTGGAC
GCCAAGCTGT TCGAAAGCAA GAAACTGTCG GCCGACCAGG TGCGCCAGGT GATCCAGTTG
ATCCTGTGGA AGCTTGAAAG CCTGCGTCAG TGGGAAAAGG AGCGCATCAC CGGTTGCATC
CAGGCCGTGG TCGAAGCGCT GGAGCTGAAG CTGCGTGACG CCATGCCGCT GATGTTCGCC
GCCATCACGG GCCAGGCCAG CTCGGTTTCG GTGCTGGACG CCATGGAAAT CCTCGGCCCC
GACCTGACGC GCTACCGCCT GCGCCAGGCC CTGGACCTGT TGGGTGGAGT GTCGAAGAAA
GAAAACAAAG AGTGGGAAAA GCTGTTGGCC TCCATCGGCT GA
 
Protein sequence
MTTVRTRIAP SPTGDPHVGT AYIALFNYCF AKQHGGEFIL RIEDTDQLRS TRESEQQIFD 
ALRWLGIEWN EGPDVGGPHG PYRQSERGEI YAKYAKELVD AGHAFYCFCT AEELEQMRAE
QQARGETPRY DGRALLLSAE EVQRRLDAGE PHVIRMKVPS EGICVVPDML RGDVEIPWDR
MDMQVLMKND GLPTYFLANV VDDHLMGITH VLRGEEWLPS APKLIKLYEY FGWEQPKLCY
MPLLRNPDKS KLSKRKNPTS VTFYERMGFM PEAMLNYLGR MGWSMPDERE KFSLAEMVEH
FDLSRISLGG PIFDIEKLSW LNGQWLRELP VEEFAARLQK WAFNSDYMMK IAPHVQGRVE
TFSQVAPLGG FFFEGALKLD AKLFESKKLS ADQVRQVIQL ILWKLESLRQ WEKERITGCI
QAVVEALELK LRDAMPLMFA AITGQASSVS VLDAMEILGP DLTRYRLRQA LDLLGGVSKK
ENKEWEKLLA SIG