Gene Pput_3777 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_3777 
Symbol 
ID5194201 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp4237849 
End bp4238292 
Gene Length444 bp 
Protein Length147 aa 
Translation table11 
GC content57% 
IMG OID640588237 
Productheat shock protein Hsp20 
Protein accessionYP_001269085 
Protein GI148548983 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0071] Molecular chaperone (small heat shock protein) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.732741 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTACTG CTTTCTCTCT TGCTCCACTG TTCCGTCATT CCGTTGGTTT CGACCGTTTC 
AACGACCTGT TCGAATCCGC GGCACGTAAC GAGGCCGGTA GCAGCTACCC GCCCTATAAC
GTGGAAAAGC ATGGCGATGA CCACTACCGC ATCGTGGTTG CTGCAGCTGG TTTCCAGGAA
GAGGACCTCG ACCTGCAGGT CGAAAAAGGT GTCCTGACCG TGACCGGTGG CAAGCGCGAC
AATAGCGCCG CTGAAGTGAC CTACCTGCAC CAGGGTATCG CACAACGCGC CTTCAAGCTG
TCGTTCCGCC TGGCAGATCA CATCGAAGTG AAGGCTGCCG GCCTGGCCAA TGGCCTGCTC
AGCATCGACC TGCTGCGCAT CGTGCCTGAA GAAGCCAAGG CCAAGCGCAT TCCGATCAAT
AGCGAAAAAC CAGCGCTGAA CTGA
 
Protein sequence
MTTAFSLAPL FRHSVGFDRF NDLFESAARN EAGSSYPPYN VEKHGDDHYR IVVAAAGFQE 
EDLDLQVEKG VLTVTGGKRD NSAAEVTYLH QGIAQRAFKL SFRLADHIEV KAAGLANGLL
SIDLLRIVPE EAKAKRIPIN SEKPALN